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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10591 O_BomoSK19533_3prime_partial:A_BomoSK_comp14248_c0_seq5
214bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10592 O_BomoSK19534_5prime_partial:A_BomoSK_comp14248_c0_seq6
295bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10593 O_BomoSK19535_3prime_partial:A_BomoSK_comp14248_c0_seq6
270bp
10594 O_BomoSK19536_internal:A_BomoSK_comp14248_c0_seq7
533bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10595 O_BomoSK19537_3prime_partial:A_BomoSK_comp14248_c0_seq8
489bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10596 O_BomoSK19538_complete:A_BomoSK_comp14248_c0_seq10
366bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10597 O_BomoSK19539_complete:A_BomoSK_comp14248_c0_seq11
251bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10598 O_BomoSK1953_complete:A_BomoSK_comp4787_c0_seq1
100bp
 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate_ligase_[Pseudoalteromonas_arctica]
10599 O_BomoSK19540_complete:A_BomoSK_comp14248_c0_seq11
147bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10600 O_BomoSK19541_5prime_partial:A_BomoSK_comp14248_c0_seq12
295bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10601 O_BomoSK19542_complete:A_BomoSK_comp14248_c0_seq12
147bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10602 O_BomoSK19543_complete:A_BomoSK_comp14248_c0_seq13
531bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10603 O_BomoSK19544_complete:A_BomoSK_comp14248_c0_seq14
193bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10604 O_BomoSK19545_complete:A_BomoSK_comp14248_c0_seq15
312bp
10605 O_BomoSK19546_complete:A_BomoSK_comp14248_c0_seq15
251bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10606 O_BomoSK19547_3prime_partial:A_BomoSK_comp14248_c0_seq16
270bp
10607 O_BomoSK19548_complete:A_BomoSK_comp14248_c0_seq16
251bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10608 O_BomoSK19549_internal:A_BomoSK_comp14248_c0_seq17
156bp
10609 O_BomoSK1954_3prime_partial:A_BomoSK_comp4788_c0_seq1
392bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYLIP_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0046872 F metal ion binding
10610 O_BomoSK19550_3prime_partial:A_BomoSK_comp14248_c0_seq17
143bp
10611 O_BomoSK19551_complete:A_BomoSK_comp14248_c0_seq18
185bp
10612 O_BomoSK19552_5prime_partial:A_BomoSK_comp14248_c0_seq18
165bp
10613 O_BomoSK19553_complete:A_BomoSK_comp14248_c0_seq19
246bp
10614 O_BomoSK19554_complete:A_BomoSK_comp14249_c0_seq1
237bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008150 P biological_process
10615 O_BomoSK19555_5prime_partial:A_BomoSK_comp14249_c0_seq1
175bp
10616 O_BomoSK19556_complete:A_BomoSK_comp14250_c0_seq1
291bp
10617 O_BomoSK19557_complete:A_BomoSK_comp14250_c0_seq1
140bp
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
10618 O_BomoSK19558_complete:A_BomoSK_comp14250_c0_seq1
125bp
10619 O_BomoSK19559_3prime_partial:A_BomoSK_comp14251_c0_seq2
256bp
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006613 P cotranslational protein targeting to membrane
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0036498 P IRE1-mediated unfolded protein response
10620 O_BomoSK1955_5prime_partial:A_BomoSK_comp4788_c0_seq1
203bp
 hypothetical_protein_[Aneurinibacillus_migulanus]
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