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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10561 O_BomoSK19506_complete:A_BomoSK_comp14242_c0_seq6
101bp
10562 O_BomoSK19507_complete:A_BomoSK_comp14243_c1_seq1
808bp
GO:0000287 F magnesium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043874 F acireductone synthase activity
GO:0046872 F metal ion binding
10563 O_BomoSK19508_complete:A_BomoSK_comp14243_c1_seq1
319bp
10564 O_BomoSK19509_complete:A_BomoSK_comp14243_c1_seq1
103bp
10565 O_BomoSK1950_5prime_partial:A_BomoSK_comp4785_c0_seq1
108bp
10566 O_BomoSK19510_complete:A_BomoSK_comp14243_c1_seq2
542bp
10567 O_BomoSK19511_complete:A_BomoSK_comp14243_c1_seq2
342bp
10568 O_BomoSK19512_complete:A_BomoSK_comp14243_c1_seq2
274bp
GO:0000287 F magnesium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043874 F acireductone synthase activity
GO:0046872 F metal ion binding
10569 O_BomoSK19513_complete:A_BomoSK_comp14243_c1_seq2
103bp
10570 O_BomoSK19514_complete:A_BomoSK_comp14243_c1_seq3
274bp
GO:0000287 F magnesium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043874 F acireductone synthase activity
GO:0046872 F metal ion binding
10571 O_BomoSK19515_complete:A_BomoSK_comp14243_c1_seq4
542bp
10572 O_BomoSK19516_complete:A_BomoSK_comp14243_c1_seq4
342bp
10573 O_BomoSK19517_complete:A_BomoSK_comp14243_c1_seq4
274bp
GO:0000287 F magnesium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043874 F acireductone synthase activity
GO:0046872 F metal ion binding
10574 O_BomoSK19518_complete:A_BomoSK_comp14243_c1_seq4
103bp
10575 O_BomoSK19519_complete:A_BomoSK_comp14243_c1_seq5
808bp
GO:0000287 F magnesium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043874 F acireductone synthase activity
GO:0046872 F metal ion binding
10576 O_BomoSK1951_complete:A_BomoSK_comp4787_c0_seq1
792bp
 PREDICTED:_ABC_transporter_G_family_member_20_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
10577 O_BomoSK19520_complete:A_BomoSK_comp14243_c1_seq5
319bp
10578 O_BomoSK19521_complete:A_BomoSK_comp14243_c1_seq5
103bp
10579 O_BomoSK19522_internal:A_BomoSK_comp14244_c1_seq5
106bp
10580 O_BomoSK19523_5prime_partial:A_BomoSK_comp14245_c0_seq4
146bp
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
10581 O_BomoSK19524_5prime_partial:A_BomoSK_comp14245_c0_seq8
553bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
10582 O_BomoSK19525_complete:A_BomoSK_comp14245_c0_seq8
119bp
10583 O_BomoSK19526_5prime_partial:A_BomoSK_comp14245_c0_seq14
553bp
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
10584 O_BomoSK19527_complete:A_BomoSK_comp14245_c0_seq14
119bp
10585 O_BomoSK19528_5prime_partial:A_BomoSK_comp14248_c0_seq1
575bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10586 O_BomoSK19529_5prime_partial:A_BomoSK_comp14248_c0_seq2
410bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10587 O_BomoSK1952_complete:A_BomoSK_comp4787_c0_seq1
133bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
10588 O_BomoSK19530_complete:A_BomoSK_comp14248_c0_seq3
312bp
10589 O_BomoSK19531_5prime_partial:A_BomoSK_comp14248_c0_seq3
295bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
10590 O_BomoSK19532_3prime_partial:A_BomoSK_comp14248_c0_seq4
204bp
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