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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10621 O_BomoSK19560_5prime_partial:A_BomoSK_comp14252_c1_seq1
281bp
10622 O_BomoSK19561_5prime_partial:A_BomoSK_comp14252_c1_seq2
635bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
GO:0033391 C chromatoid body
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
GO:0071546 C pi-body
10623 O_BomoSK19562_5prime_partial:A_BomoSK_comp14252_c1_seq3
176bp
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
10624 O_BomoSK19563_5prime_partial:A_BomoSK_comp14252_c1_seq4
740bp
10625 O_BomoSK19564_complete:A_BomoSK_comp14253_c0_seq1
607bp
GO:0000209 P protein polyubiquitination
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005652 C nuclear lamina
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006997 P nucleus organization
GO:0007060 P male meiosis chromosome segregation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0008270 F zinc ion binding
GO:0010032 P meiotic chromosome condensation
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0071763 P nuclear membrane organization
10626 O_BomoSK19565_complete:A_BomoSK_comp14254_c3_seq1
214bp
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
10627 O_BomoSK19566_complete:A_BomoSK_comp14254_c3_seq3
214bp
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
10628 O_BomoSK19567_complete:A_BomoSK_comp14254_c3_seq10
214bp
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
10629 O_BomoSK19568_complete:A_BomoSK_comp14254_c3_seq12
214bp
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
10630 O_BomoSK19569_complete:A_BomoSK_comp14255_c0_seq1
157bp
10631 O_BomoSK1956_3prime_partial:A_BomoSK_comp4791_c0_seq1
449bp
 PREDICTED:_UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
10632 O_BomoSK19570_complete:A_BomoSK_comp14255_c0_seq4
157bp
10633 O_BomoSK19571_complete:A_BomoSK_comp14255_c0_seq6
157bp
10634 O_BomoSK19572_3prime_partial:A_BomoSK_comp14255_c0_seq9
189bp
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10635 O_BomoSK19573_complete:A_BomoSK_comp14255_c0_seq12
157bp
10636 O_BomoSK19574_complete:A_BomoSK_comp14256_c0_seq1
464bp
10637 O_BomoSK19575_complete:A_BomoSK_comp14256_c0_seq1
147bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005528 F FK506 binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
10638 O_BomoSK19576_3prime_partial:A_BomoSK_comp14257_c0_seq1
429bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
10639 O_BomoSK19577_complete:A_BomoSK_comp14257_c0_seq1
180bp
10640 O_BomoSK19578_5prime_partial:A_BomoSK_comp14257_c0_seq1
179bp
10641 O_BomoSK19579_5prime_partial:A_BomoSK_comp14257_c0_seq1
159bp
10642 O_BomoSK1957_3prime_partial:A_BomoSK_comp4793_c0_seq1
301bp
 PREDICTED:_myotubularin-related_protein_3_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046872 F metal ion binding
10643 O_BomoSK19580_internal:A_BomoSK_comp14257_c0_seq2
625bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
10644 O_BomoSK19581_5prime_partial:A_BomoSK_comp14257_c0_seq2
179bp
10645 O_BomoSK19582_5prime_partial:A_BomoSK_comp14257_c0_seq2
159bp
10646 O_BomoSK19583_complete:A_BomoSK_comp14257_c0_seq2
123bp
10647 O_BomoSK19584_3prime_partial:A_BomoSK_comp14257_c0_seq3
4264bp
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008092 F cytoskeletal protein binding
GO:0008307 F structural constituent of muscle
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030506 F ankyrin binding
GO:0031581 P hemidesmosome assembly
GO:0042383 C sarcolemma
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0070062 C extracellular exosome
10648 O_BomoSK19585_complete:A_BomoSK_comp14257_c0_seq3
180bp
10649 O_BomoSK19586_5prime_partial:A_BomoSK_comp14257_c0_seq3
179bp
10650 O_BomoSK19587_5prime_partial:A_BomoSK_comp14257_c0_seq3
159bp
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