SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/51699
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1501 O_BomoN4EE11351_complete:A_BomoN4EE_TR29467_c0_g3_i3
1047bp
 PREDICTED:_uncharacterized_protein_LOC101736312_isoform_X1_[Bombyx_mori]
1502 O_BomoN4EE11352_complete:A_BomoN4EE_TR29467_c0_g3_i3
297bp
 PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1503 O_BomoN4EE11353_complete:A_BomoN4EE_TR29467_c0_g3_i3
108bp
1504 O_BomoN4EE11354_complete:A_BomoN4EE_TR29467_c0_g3_i3
100bp
 PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Papilio_polytes]
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
1505 O_BomoN4EE11355_complete:A_BomoN4EE_TR29470_c0_g2_i1
544bp
 hypothetical_protein_KGM_02142_[Danaus_plexippus]
GO:0003824 F catalytic activity
GO:0004474 F malate synthase activity
GO:0005737 C cytoplasm
GO:0006097 P glyoxylate cycle
GO:0006099 P tricarboxylic acid cycle
GO:0016740 F transferase activity
1506 O_BomoN4EE11356_complete:A_BomoN4EE_TR29470_c0_g2_i1
100bp
1507 O_BomoN4EE11357_complete:A_BomoN4EE_TR29471_c0_g2_i1
290bp
 PREDICTED:_uridine-cytidine_kinase_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006238 P CMP salvage
GO:0006909 P phagocytosis
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019206 F nucleoside kinase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0044211 P CTP salvage
1508 O_BomoN4EE11358_complete:A_BomoN4EE_TR29471_c0_g4_i1
236bp
 PREDICTED:_uridine-cytidine_kinase_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006238 P CMP salvage
GO:0006909 P phagocytosis
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019206 F nucleoside kinase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0044211 P CTP salvage
1509 O_BomoN4EE11359_complete:A_BomoN4EE_TR29472_c0_g1_i1
183bp
 anaphase_promoting_complex_subunit_10_[Bombyx_mori]
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007113 P endomitotic cell cycle
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
GO:0090302 F ubiquitin protein ligase activity
1510 O_BomoN4EE1135_complete:A_BomoN4EE_TR15905_c0_g1_i1
118bp
1511 O_BomoN4EE11360_complete:A_BomoN4EE_TR29472_c0_g2_i1
139bp
 anaphase_promoting_complex_subunit_10_[Bombyx_mori]
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007113 P endomitotic cell cycle
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
GO:0090302 F ubiquitin protein ligase activity
1512 O_BomoN4EE11361_complete:A_BomoN4EE_TR29473_c0_g1_i1
244bp
 hypothetical_protein_KGM_22003_[Danaus_plexippus]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
1513 O_BomoN4EE11362_complete:A_BomoN4EE_TR29473_c0_g1_i1
125bp
1514 O_BomoN4EE11363_complete:A_BomoN4EE_TR29473_c0_g2_i1
244bp
 hypothetical_protein_KGM_22003_[Danaus_plexippus]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
1515 O_BomoN4EE11364_complete:A_BomoN4EE_TR29473_c0_g2_i1
125bp
1516 O_BomoN4EE11365_5prime_partial:A_BomoN4EE_TR29473_c1_g1_i1
2108bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
1517 O_BomoN4EE11366_5prime_partial:A_BomoN4EE_TR29473_c1_g1_i2
2080bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
1518 O_BomoN4EE11367_5prime_partial:A_BomoN4EE_TR29473_c1_g2_i1
297bp
 PREDICTED:_brahma-associated_protein_of_60_kDa_[Papilio_xuthus]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005719 C euchromatin
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0010628 P positive regulation of gene expression
GO:0017022 F myosin binding
GO:0031453 P positive regulation of heterochromatin assembly
GO:0035060 C brahma complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
1519 O_BomoN4EE11368_5prime_partial:A_BomoN4EE_TR29474_c0_g1_i1
328bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X2_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0006592 P ornithine biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0044822 F RNA binding
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1520 O_BomoN4EE11369_complete:A_BomoN4EE_TR29474_c0_g1_i3
564bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1521 O_BomoN4EE1136_5prime_partial:A_BomoN4EE_TR15908_c0_g1_i1
113bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
1522 O_BomoN4EE11370_complete:A_BomoN4EE_TR29474_c0_g1_i3
105bp
1523 O_BomoN4EE11371_5prime_partial:A_BomoN4EE_TR29474_c0_g1_i4
207bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X2_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0006592 P ornithine biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0044822 F RNA binding
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1524 O_BomoN4EE11372_complete:A_BomoN4EE_TR29474_c0_g1_i5
304bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0006592 P ornithine biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0044822 F RNA binding
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1525 O_BomoN4EE11373_complete:A_BomoN4EE_TR29474_c0_g1_i6
183bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0006592 P ornithine biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0044822 F RNA binding
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1526 O_BomoN4EE11374_complete:A_BomoN4EE_TR29474_c0_g2_i1
481bp
 PREDICTED:_delta-1-pyrroline-5-carboxylate_synthase_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004349 F glutamate 5-kinase activity
GO:0004350 F glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006536 P glutamate metabolic process
GO:0006561 P proline biosynthetic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016740 F transferase activity
GO:0019240 P citrulline biosynthetic process
GO:0034214 P protein hexamerization
GO:0055114 P obsolete oxidation-reduction process
GO:0055129 P L-proline biosynthetic process
1527 O_BomoN4EE11375_complete:A_BomoN4EE_TR29474_c0_g2_i1
105bp
1528 O_BomoN4EE11376_complete:A_BomoN4EE_TR29478_c0_g1_i1
207bp
 hypothetical_protein_KGM_05068_[Danaus_plexippus]
1529 O_BomoN4EE11377_5prime_partial:A_BomoN4EE_TR29478_c0_g3_i1
142bp
 PREDICTED:_uncharacterized_protein_LOC106131076_[Amyelois_transitella]
1530 O_BomoN4EE11378_complete:A_BomoN4EE_TR29478_c0_g3_i2
340bp
 hypothetical_protein_KGM_05068_[Danaus_plexippus]
previous next from show/51699

- SilkBase 1999-2023 -