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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1531 O_BomoN4EE11379_complete:A_BomoN4EE_TR29479_c0_g1_i1
726bp
 PREDICTED:_sentrin-specific_protease_6-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
1532 O_BomoN4EE1137_3prime_partial:A_BomoN4EE_TR15910_c0_g1_i1
117bp
1533 O_BomoN4EE11380_complete:A_BomoN4EE_TR29479_c0_g1_i1
119bp
1534 O_BomoN4EE11381_complete:A_BomoN4EE_TR29479_c0_g1_i2
791bp
 PREDICTED:_sentrin-specific_protease_6-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
1535 O_BomoN4EE11382_5prime_partial:A_BomoN4EE_TR29479_c0_g1_i2
519bp
 PREDICTED:_sentrin-specific_protease_6-like_[Bombyx_mori]
1536 O_BomoN4EE11383_complete:A_BomoN4EE_TR29479_c0_g1_i2
119bp
1537 O_BomoN4EE11384_complete:A_BomoN4EE_TR29479_c0_g1_i2
102bp
1538 O_BomoN4EE11385_complete:A_BomoN4EE_TR29480_c0_g1_i1
402bp
 Trypsin_theta_[Operophtera_brumata]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007586 P digestion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
1539 O_BomoN4EE11386_complete:A_BomoN4EE_TR29480_c0_g1_i2
288bp
 PREDICTED:_uncharacterized_protein_LOC106132906_[Amyelois_transitella]
1540 O_BomoN4EE11387_complete:A_BomoN4EE_TR29480_c1_g1_i1
186bp
 PREDICTED:_U11/U12_small_nuclear_ribonucleoprotein_35_kDa_protein-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000243 C commitment complex
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005689 C U12-type spliceosomal complex
GO:0017069 F snRNA binding
GO:0071011 C precatalytic spliceosome
1541 O_BomoN4EE11388_5prime_partial:A_BomoN4EE_TR29480_c1_g1_i1
138bp
1542 O_BomoN4EE11389_5prime_partial:A_BomoN4EE_TR29480_c1_g1_i1
130bp
1543 O_BomoN4EE1138_complete:A_BomoN4EE_TR15911_c0_g1_i1
202bp
 PREDICTED:_ras-related_protein_Rab-35_[Papilio_polytes]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0019003 F GDP binding
GO:0019882 P antigen processing and presentation
GO:0030136 C clathrin-coated vesicle
GO:0031175 P neuron projection development
GO:0031253 C cell projection membrane
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042470 C melanosome
GO:0045171 C intercellular bridge
GO:0045334 C clathrin-coated endocytic vesicle
GO:0048227 P plasma membrane to endosome transport
GO:0070062 C extracellular exosome
GO:1990090 P cellular response to nerve growth factor stimulus
1544 O_BomoN4EE11390_3prime_partial:A_BomoN4EE_TR29483_c0_g1_i1
721bp
 PREDICTED:_uncharacterized_protein_LOC101744340_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006766 P vitamin metabolic process
GO:0006810 P transport
GO:0006898 P receptor-mediated endocytosis
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015235 F ABC-type vitamin B12 transporter activity
GO:0015889 P cobalamin transport
GO:0016020 C membrane
GO:0020028 P endocytic hemoglobin import into cell
GO:0030135 C coated vesicle
GO:0030492 F hemoglobin binding
GO:0030666 C endocytic vesicle membrane
GO:0031419 F cobalamin binding
GO:0031526 C brush border membrane
GO:0042802 F identical protein binding
GO:0043202 C lysosomal lumen
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0070207 P protein homotrimerization
1545 O_BomoN4EE11391_complete:A_BomoN4EE_TR29483_c0_g1_i1
126bp
1546 O_BomoN4EE11392_complete:A_BomoN4EE_TR29483_c0_g1_i1
103bp
1547 O_BomoN4EE11393_complete:A_BomoN4EE_TR29483_c0_g1_i1
103bp
1548 O_BomoN4EE11394_complete:A_BomoN4EE_TR29483_c0_g2_i1
419bp
 PREDICTED:_uncharacterized_protein_LOC101744340_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0004222 F metalloendopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0022617 P extracellular matrix disassembly
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
1549 O_BomoN4EE11395_complete:A_BomoN4EE_TR29483_c0_g2_i1
126bp
1550 O_BomoN4EE11396_complete:A_BomoN4EE_TR29483_c0_g2_i1
103bp
1551 O_BomoN4EE11397_complete:A_BomoN4EE_TR29483_c0_g2_i1
103bp
1552 O_BomoN4EE11398_5prime_partial:A_BomoN4EE_TR29483_c0_g3_i1
405bp
 PREDICTED:_uncharacterized_protein_LOC101744340_[Bombyx_mori]
1553 O_BomoN4EE11399_complete:A_BomoN4EE_TR29489_c0_g1_i1
336bp
 PREDICTED:_protein_Mo25_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019233 P sensory perception of pain
1554 O_BomoN4EE1139_5prime_partial:A_BomoN4EE_TR15912_c0_g1_i1
139bp
 PREDICTED:_collagen_alpha_chain_CG42342-like_isoform_X2_[Papilio_xuthus]
1555 O_BomoN4EE113_internal:A_BomoN4EE_TR1777_c0_g1_i1
122bp
 PREDICTED:_uncharacterized_protein_LOC101745871_[Bombyx_mori]
1556 O_BomoN4EE11400_complete:A_BomoN4EE_TR29489_c0_g1_i2
336bp
 PREDICTED:_protein_Mo25_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019233 P sensory perception of pain
1557 O_BomoN4EE11401_complete:A_BomoN4EE_TR29489_c0_g1_i3
336bp
 PREDICTED:_protein_Mo25_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019233 P sensory perception of pain
1558 O_BomoN4EE11402_complete:A_BomoN4EE_TR29489_c0_g1_i5
336bp
 PREDICTED:_protein_Mo25_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019233 P sensory perception of pain
1559 O_BomoN4EE11403_complete:A_BomoN4EE_TR29489_c0_g1_i6
336bp
 PREDICTED:_protein_Mo25_[Bombyx_mori]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0019233 P sensory perception of pain
1560 O_BomoN4EE11404_complete:A_BomoN4EE_TR29490_c0_g1_i1
244bp
 PREDICTED:_uncharacterized_protein_LOC101735509_isoform_X2_[Bombyx_mori]
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