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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1471 O_BomoN4EE11324_complete:A_BomoN4EE_TR29318_c0_g2_i1
328bp
 PREDICTED:_purine_nucleoside_phosphorylase-like_isoform_X1_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
1472 O_BomoN4EE11325_complete:A_BomoN4EE_TR29318_c0_g2_i2
322bp
 PREDICTED:_purine_nucleoside_phosphorylase-like_isoform_X2_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0004731 F purine-nucleoside phosphorylase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0043101 P purine-containing compound salvage
1473 O_BomoN4EE11326_complete:A_BomoN4EE_TR29319_c0_g1_i1
255bp
 ALY_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0051028 P mRNA transport
1474 O_BomoN4EE11327_complete:A_BomoN4EE_TR29319_c0_g2_i1
335bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
1475 O_BomoN4EE11328_complete:A_BomoN4EE_TR29319_c0_g2_i2
216bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
1476 O_BomoN4EE11329_complete:A_BomoN4EE_TR29319_c0_g2_i4
177bp
 ALY_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0051028 P mRNA transport
1477 O_BomoN4EE1132_5prime_partial:A_BomoN4EE_TR15895_c0_g1_i1
110bp
1478 O_BomoN4EE11330_complete:A_BomoN4EE_TR29319_c0_g2_i5
107bp
 ALY_[Bombyx_mori]
1479 O_BomoN4EE11331_5prime_partial:A_BomoN4EE_TR29354_c0_g1_i1
155bp
1480 O_BomoN4EE11332_complete:A_BomoN4EE_TR29373_c0_g1_i1
101bp
1481 O_BomoN4EE11333_5prime_partial:A_BomoN4EE_TR29439_c0_g1_i1
104bp
 PREDICTED:_uncharacterized_protein_LOC105204256_[Solenopsis_invicta]
1482 O_BomoN4EE11334_5prime_partial:A_BomoN4EE_TR29439_c0_g3_i1
105bp
 PREDICTED:_uncharacterized_protein_LOC105204256_[Solenopsis_invicta]
1483 O_BomoN4EE11335_3prime_partial:A_BomoN4EE_TR29442_c0_g1_i1
153bp
 PREDICTED:_elongation_of_very_long_chain_fatty_acids_protein_7-like_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0019367 P fatty acid elongation, saturated fatty acid
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0042761 P very long-chain fatty acid biosynthetic process
1484 O_BomoN4EE11336_complete:A_BomoN4EE_TR29442_c0_g2_i1
280bp
 PREDICTED:_elongation_of_very_long_chain_fatty_acids_protein_7-like_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0019367 P fatty acid elongation, saturated fatty acid
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0042761 P very long-chain fatty acid biosynthetic process
1485 O_BomoN4EE11337_5prime_partial:A_BomoN4EE_TR29446_c1_g1_i1
111bp
1486 O_BomoN4EE11338_complete:A_BomoN4EE_TR29465_c0_g1_i1
489bp
 PREDICTED:_uncharacterized_protein_YHR080C-like_isoform_X1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1487 O_BomoN4EE11339_complete:A_BomoN4EE_TR29467_c0_g1_i1
1047bp
 PREDICTED:_uncharacterized_protein_LOC101736312_isoform_X1_[Bombyx_mori]
1488 O_BomoN4EE1133_complete:A_BomoN4EE_TR15895_c0_g1_i1
102bp
1489 O_BomoN4EE11340_complete:A_BomoN4EE_TR29467_c0_g1_i1
297bp
 PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1490 O_BomoN4EE11341_complete:A_BomoN4EE_TR29467_c0_g2_i1
1047bp
 PREDICTED:_uncharacterized_protein_LOC101736312_isoform_X1_[Bombyx_mori]
1491 O_BomoN4EE11342_complete:A_BomoN4EE_TR29467_c0_g2_i1
272bp
 PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1492 O_BomoN4EE11343_complete:A_BomoN4EE_TR29467_c0_g3_i1
1047bp
 PREDICTED:_uncharacterized_protein_LOC101736312_isoform_X1_[Bombyx_mori]
1493 O_BomoN4EE11344_complete:A_BomoN4EE_TR29467_c0_g3_i1
297bp
 PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1494 O_BomoN4EE11345_complete:A_BomoN4EE_TR29467_c0_g3_i1
108bp
1495 O_BomoN4EE11346_complete:A_BomoN4EE_TR29467_c0_g3_i1
100bp
 PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Papilio_polytes]
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
1496 O_BomoN4EE11347_complete:A_BomoN4EE_TR29467_c0_g3_i2
1047bp
 PREDICTED:_uncharacterized_protein_LOC101736312_isoform_X1_[Bombyx_mori]
1497 O_BomoN4EE11348_complete:A_BomoN4EE_TR29467_c0_g3_i2
337bp
 PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Amyelois_transitella]
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
1498 O_BomoN4EE11349_complete:A_BomoN4EE_TR29467_c0_g3_i2
297bp
 PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1499 O_BomoN4EE1134_5prime_partial:A_BomoN4EE_TR15899_c0_g1_i1
105bp
1500 O_BomoN4EE11350_complete:A_BomoN4EE_TR29467_c0_g3_i2
108bp
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