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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3901 O_BomoMG16444_5prime_partial:A_BomoMG_comp40159_c0_seq4
262bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
3902 O_BomoMG16446_internal:A_BomoMG_comp40159_c0_seq5
211bp
3903 O_BomoMG16449_5prime_partial:A_BomoMG_comp40160_c0_seq1
119bp
3904 O_BomoMG1644_5prime_partial:A_BomoMG_comp20545_c0_seq1
175bp
 cuticular_protein_RR-1_motif_42_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
3905 O_BomoMG16450_5prime_partial:A_BomoMG_comp40160_c0_seq2
237bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005874 C microtubule
GO:0006998 P nuclear envelope organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007084 P mitotic nuclear membrane reassembly
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051301 P cell division
3906 O_BomoMG16451_internal:A_BomoMG_comp40161_c0_seq1
595bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
3907 O_BomoMG16453_complete:A_BomoMG_comp40161_c0_seq2
401bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
3908 O_BomoMG16457_3prime_partial:A_BomoMG_comp40161_c1_seq1
126bp
3909 O_BomoMG16458_3prime_partial:A_BomoMG_comp40162_c0_seq1
525bp
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
3910 O_BomoMG1645_complete:A_BomoMG_comp20546_c0_seq1
293bp
 PREDICTED:_collagenase-like_[Papilio_machaon]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
3911 O_BomoMG16460_5prime_partial:A_BomoMG_comp40163_c0_seq1
186bp
3912 O_BomoMG16461_3prime_partial:A_BomoMG_comp40163_c1_seq1
119bp
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046872 F metal ion binding
3913 O_BomoMG16463_5prime_partial:A_BomoMG_comp40163_c1_seq3
182bp
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0046872 F metal ion binding
3914 O_BomoMG16464_internal:A_BomoMG_comp40163_c2_seq1
352bp
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3915 O_BomoMG16465_internal:A_BomoMG_comp40163_c3_seq1
382bp
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
3916 O_BomoMG16467_complete:A_BomoMG_comp40164_c0_seq2
462bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
3917 O_BomoMG1646_complete:A_BomoMG_comp20548_c0_seq1
566bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_4-coumarate--CoA_ligase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3918 O_BomoMG16470_complete:A_BomoMG_comp40164_c0_seq3
368bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
3919 O_BomoMG16473_complete:A_BomoMG_comp40164_c0_seq4
368bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
3920 O_BomoMG16477_complete:A_BomoMG_comp40164_c0_seq6
408bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
3921 O_BomoMG16480_complete:A_BomoMG_comp40166_c1_seq1
1125bp
GO:0000166 F nucleotide binding
GO:0000827 F inositol-1,3,4,5,6-pentakisphosphate kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0033857 F diphosphoinositol-pentakisphosphate kinase activity
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3922 O_BomoMG16483_complete:A_BomoMG_comp40166_c1_seq2
417bp
GO:0000166 F nucleotide binding
GO:0000827 F inositol-1,3,4,5,6-pentakisphosphate kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0033857 F diphosphoinositol-pentakisphosphate kinase activity
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3923 O_BomoMG16485_complete:A_BomoMG_comp40166_c1_seq3
1524bp
GO:0000166 F nucleotide binding
GO:0000827 F inositol-1,3,4,5,6-pentakisphosphate kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0033857 F diphosphoinositol-pentakisphosphate kinase activity
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3924 O_BomoMG16488_complete:A_BomoMG_comp40166_c1_seq4
1133bp
GO:0000166 F nucleotide binding
GO:0000827 F inositol-1,3,4,5,6-pentakisphosphate kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0033857 F diphosphoinositol-pentakisphosphate kinase activity
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3925 O_BomoMG1648_complete:A_BomoMG_comp20549_c0_seq1
133bp
 thymosin_isoform_2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
3926 O_BomoMG16491_complete:A_BomoMG_comp40166_c1_seq5
1516bp
GO:0000166 F nucleotide binding
GO:0000827 F inositol-1,3,4,5,6-pentakisphosphate kinase activity
GO:0000832 F inositol hexakisphosphate 5-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0033857 F diphosphoinositol-pentakisphosphate kinase activity
GO:0052723 F inositol hexakisphosphate 1-kinase activity
GO:0052724 F inositol hexakisphosphate 3-kinase activity
3927 O_BomoMG16494_complete:A_BomoMG_comp40167_c0_seq1
114bp
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0048487 F beta-tubulin binding
3928 O_BomoMG16495_5prime_partial:A_BomoMG_comp40167_c1_seq1
187bp
3929 O_BomoMG16496_complete:A_BomoMG_comp40167_c1_seq1
109bp
3930 O_BomoMG16497_5prime_partial:A_BomoMG_comp40167_c1_seq2
167bp
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