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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3871 O_BomoMG16388_complete:A_BomoMG_comp40142_c0_seq2
814bp
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
3872 O_BomoMG16389_5prime_partial:A_BomoMG_comp40143_c0_seq3
267bp
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3873 O_BomoMG16391_5prime_partial:A_BomoMG_comp40143_c0_seq4
267bp
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3874 O_BomoMG16393_complete:A_BomoMG_comp40144_c0_seq1
525bp
3875 O_BomoMG16394_complete:A_BomoMG_comp40145_c0_seq1
343bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030663 C COPI-coated vesicle membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
3876 O_BomoMG16395_complete:A_BomoMG_comp40145_c0_seq1
158bp
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016197 P endosomal transport
GO:0030133 C transport vesicle
GO:0031083 C BLOC-1 complex
3877 O_BomoMG16396_complete:A_BomoMG_comp40145_c0_seq2
343bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030663 C COPI-coated vesicle membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
3878 O_BomoMG16397_complete:A_BomoMG_comp40145_c0_seq2
128bp
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016197 P endosomal transport
GO:0030133 C transport vesicle
GO:0031083 C BLOC-1 complex
3879 O_BomoMG16398_internal:A_BomoMG_comp40146_c0_seq1
201bp
3880 O_BomoMG16399_3prime_partial:A_BomoMG_comp40146_c0_seq2
202bp
3881 O_BomoMG163_3prime_partial:A_BomoMG_comp17362_c0_seq1
484bp
 PREDICTED:_E3_ubiquitin-protein_ligase_CBL-B-B_[Papilio_xuthus]
GO:0001784 F phosphotyrosine residue binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007166 P cell surface receptor signaling pathway
GO:0008270 F zinc ion binding
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016600 C flotillin complex
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0023051 P regulation of signaling
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0045453 P bone resorption
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048260 P positive regulation of receptor-mediated endocytosis
3882 O_BomoMG16400_internal:A_BomoMG_comp40146_c1_seq1
375bp
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0090630 P activation of GTPase activity
3883 O_BomoMG16401_5prime_partial:A_BomoMG_comp40146_c1_seq2
386bp
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0090630 P activation of GTPase activity
3884 O_BomoMG16403_5prime_partial:A_BomoMG_comp40147_c0_seq2
123bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042733 P embryonic digit morphogenesis
3885 O_BomoMG16406_3prime_partial:A_BomoMG_comp40149_c0_seq1
455bp
3886 O_BomoMG16407_3prime_partial:A_BomoMG_comp40149_c0_seq3
519bp
3887 O_BomoMG16408_complete:A_BomoMG_comp40150_c0_seq1
654bp
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
3888 O_BomoMG1640_complete:A_BomoMG_comp20542_c0_seq2
374bp
 PREDICTED:_1-acylglycerol-3-phosphate_O-acyltransferase_ABHD5_isoform_X3_[Bombyx_mori]
GO:0005789 C endoplasmic reticulum membrane
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0006644 P phospholipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019915 P lipid storage
GO:0052689 F carboxylic ester hydrolase activity
3889 O_BomoMG16410_complete:A_BomoMG_comp40152_c0_seq1
1159bp
3890 O_BomoMG16412_complete:A_BomoMG_comp40153_c0_seq1
653bp
3891 O_BomoMG16413_complete:A_BomoMG_comp40155_c0_seq1
592bp
GO:0000139 C Golgi membrane
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016409 F palmitoyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0030660 C Golgi-associated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0042953 P lipoprotein transport
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:1903830 P magnesium ion transmembrane transport
3892 O_BomoMG16415_5prime_partial:A_BomoMG_comp40156_c0_seq1
851bp
3893 O_BomoMG16419_complete:A_BomoMG_comp40157_c0_seq3
376bp
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0061015 P snRNA import into nucleus
GO:0070062 C extracellular exosome
3894 O_BomoMG16420_complete:A_BomoMG_comp40158_c0_seq1
346bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
3895 O_BomoMG16423_complete:A_BomoMG_comp40158_c0_seq3
521bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
3896 O_BomoMG16428_complete:A_BomoMG_comp40158_c0_seq4
573bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
3897 O_BomoMG16433_complete:A_BomoMG_comp40158_c0_seq5
398bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0008358 P maternal determination of anterior/posterior axis, embryo
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016015 F morphogen activity
GO:0031594 C neuromuscular junction
GO:0033256 C I-kappaB/NF-kappaB complex
GO:0034097 P response to cytokine
GO:0035006 P melanization defense response
GO:0035206 P regulation of hemocyte proliferation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042387 P plasmatocyte differentiation
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048935 P peripheral nervous system neuron development
GO:0070379 F high mobility group box 1 binding
GO:0070491 F DNA-binding transcription factor binding
3898 O_BomoMG16436_5prime_partial:A_BomoMG_comp40159_c0_seq1
674bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
3899 O_BomoMG1643_complete:A_BomoMG_comp20543_c0_seq1
288bp
 thioredoxin_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0015035 F protein-disulfide reductase activity
GO:0015036 F disulfide oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0034599 P cellular response to oxidative stress
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
3900 O_BomoMG16440_5prime_partial:A_BomoMG_comp40159_c0_seq2
202bp
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