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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2371 O_BomoMG13784_complete:A_BomoMG_comp39545_c0_seq2
127bp
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
2372 O_BomoMG13785_complete:A_BomoMG_comp39545_c0_seq4
325bp
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
2373 O_BomoMG13786_5prime_partial:A_BomoMG_comp39546_c0_seq1
202bp
2374 O_BomoMG13788_5prime_partial:A_BomoMG_comp39546_c0_seq3
137bp
2375 O_BomoMG1378_complete:A_BomoMG_comp20222_c0_seq1
131bp
 Uncharacterized_protein_OBRU01_07177_[Operophtera_brumata]
2376 O_BomoMG13790_internal:A_BomoMG_comp39546_c2_seq1
133bp
2377 O_BomoMG13792_5prime_partial:A_BomoMG_comp39546_c2_seq2
308bp
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
2378 O_BomoMG13793_5prime_partial:A_BomoMG_comp39546_c2_seq3
251bp
2379 O_BomoMG13794_3prime_partial:A_BomoMG_comp39548_c0_seq1
648bp
2380 O_BomoMG13795_internal:A_BomoMG_comp39548_c0_seq2
316bp
2381 O_BomoMG13796_5prime_partial:A_BomoMG_comp39551_c0_seq1
557bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
2382 O_BomoMG13798_5prime_partial:A_BomoMG_comp39551_c0_seq2
544bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
2383 O_BomoMG1379_complete:A_BomoMG_comp20222_c0_seq2
156bp
 Uncharacterized_protein_OBRU01_07177_[Operophtera_brumata]
2384 O_BomoMG13800_internal:A_BomoMG_comp39551_c0_seq3
248bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001711 P endodermal cell fate commitment
GO:0001832 P blastocyst growth
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016055 P Wnt signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0019827 P stem cell population maintenance
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
2385 O_BomoMG13803_5prime_partial:A_BomoMG_comp39552_c0_seq1
193bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
2386 O_BomoMG13804_internal:A_BomoMG_comp39552_c0_seq2
1158bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
2387 O_BomoMG13808_internal:A_BomoMG_comp39553_c0_seq1
103bp
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009792 P embryo development ending in birth or egg hatching
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0030239 P myofibril assembly
GO:0031430 C M band
GO:0032956 P regulation of actin cytoskeleton organization
GO:0045987 P positive regulation of smooth muscle contraction
GO:0048815 P hermaphrodite genitalia morphogenesis
GO:0055120 C striated muscle dense body
GO:0060279 P positive regulation of ovulation
GO:1903356 P positive regulation of distal tip cell migration
GO:1904901 P positive regulation of myosin II filament organization
2388 O_BomoMG13809_complete:A_BomoMG_comp39554_c0_seq1
228bp
2389 O_BomoMG1380_5prime_partial:A_BomoMG_comp20223_c0_seq1
347bp
 ribosomal_protein_P0_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
2390 O_BomoMG13810_5prime_partial:A_BomoMG_comp39554_c0_seq3
102bp
2391 O_BomoMG13811_complete:A_BomoMG_comp39554_c0_seq4
740bp
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0005903 C brush border
GO:0007605 P sensory perception of sound
GO:0030046 P parallel actin filament bundle assembly
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032029 F myosin tail binding
GO:0032420 C stereocilium
GO:0032532 P regulation of microvillus length
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0042995 C cell projection
GO:0043623 P protein-containing complex assembly
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0050885 P neuromuscular process controlling balance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1904106 P protein localization to microvillus
GO:1904970 P brush border assembly
2392 O_BomoMG13813_complete:A_BomoMG_comp39555_c0_seq1
338bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2393 O_BomoMG13815_complete:A_BomoMG_comp39555_c0_seq2
332bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2394 O_BomoMG13817_complete:A_BomoMG_comp39555_c0_seq3
332bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2395 O_BomoMG13819_complete:A_BomoMG_comp39555_c0_seq4
332bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2396 O_BomoMG13821_complete:A_BomoMG_comp39555_c0_seq6
338bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2397 O_BomoMG13823_complete:A_BomoMG_comp39555_c0_seq7
332bp
GO:0016491 F oxidoreductase activity
GO:0047115 F trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
GO:0047837 F D-xylose 1-dehydrogenase (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
2398 O_BomoMG13825_complete:A_BomoMG_comp39556_c0_seq1
276bp
GO:0000139 C Golgi membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006487 P protein N-linked glycosylation
GO:0006874 P cellular calcium ion homeostasis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032472 P Golgi calcium ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035751 P regulation of lysosomal lumen pH
GO:0043231 C intracellular membrane-bounded organelle
2399 O_BomoMG13828_5prime_partial:A_BomoMG_comp39556_c0_seq2
293bp
GO:0000139 C Golgi membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006487 P protein N-linked glycosylation
GO:0006874 P cellular calcium ion homeostasis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032472 P Golgi calcium ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035751 P regulation of lysosomal lumen pH
GO:0043231 C intracellular membrane-bounded organelle
2400 O_BomoMG1382_5prime_partial:A_BomoMG_comp20224_c0_seq1
450bp
 alkaline_phosphatase_[Bombyx_mandarina]
GO:0003824 F catalytic activity
GO:0004035 F alkaline phosphatase activity
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
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