SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/16985
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2341 O_BomoMG13740_5prime_partial:A_BomoMG_comp39533_c0_seq2
427bp
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
2342 O_BomoMG13743_5prime_partial:A_BomoMG_comp39533_c0_seq3
427bp
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
2343 O_BomoMG13746_complete:A_BomoMG_comp39534_c0_seq1
1176bp
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032549 F ribonucleoside binding
GO:0046872 F metal ion binding
2344 O_BomoMG13747_internal:A_BomoMG_comp39536_c0_seq1
171bp
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
2345 O_BomoMG13749_internal:A_BomoMG_comp39536_c1_seq1
124bp
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
2346 O_BomoMG1374_complete:A_BomoMG_comp20218_c0_seq1
127bp
 uncharacterized_protein_LOC778505_[Bombyx_mori]
2347 O_BomoMG13750_internal:A_BomoMG_comp39536_c1_seq2
411bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
2348 O_BomoMG13753_3prime_partial:A_BomoMG_comp39536_c1_seq3
1089bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
2349 O_BomoMG13757_complete:A_BomoMG_comp39537_c1_seq1
142bp
GO:0000164 C protein phosphatase type 1 complex
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0032515 P negative regulation of phosphoprotein phosphatase activity
2350 O_BomoMG13758_complete:A_BomoMG_comp39538_c0_seq2
642bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0007601 P visual perception
GO:0050896 P response to stimulus
2351 O_BomoMG1375_complete:A_BomoMG_comp20220_c0_seq1
148bp
 ribosomal_protein_L22_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
2352 O_BomoMG13761_complete:A_BomoMG_comp39538_c0_seq3
607bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0007601 P visual perception
GO:0050896 P response to stimulus
2353 O_BomoMG13764_3prime_partial:A_BomoMG_comp39539_c0_seq2
234bp
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
2354 O_BomoMG13766_5prime_partial:A_BomoMG_comp39539_c1_seq1
373bp
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
2355 O_BomoMG13767_5prime_partial:A_BomoMG_comp39540_c0_seq1
558bp
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
2356 O_BomoMG13768_5prime_partial:A_BomoMG_comp39540_c0_seq2
508bp
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
2357 O_BomoMG13769_internal:A_BomoMG_comp39541_c0_seq1
377bp
GO:0005737 C cytoplasm
2358 O_BomoMG1376_5prime_partial:A_BomoMG_comp20221_c0_seq1
499bp
 beta-fructofuranosidase_precursor_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004564 F beta-fructofuranosidase activity
GO:0004575 F sucrose alpha-glucosidase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005985 P sucrose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2359 O_BomoMG13771_internal:A_BomoMG_comp39541_c0_seq2
369bp
GO:0005737 C cytoplasm
2360 O_BomoMG13772_5prime_partial:A_BomoMG_comp39541_c0_seq3
727bp
GO:0005737 C cytoplasm
2361 O_BomoMG13773_3prime_partial:A_BomoMG_comp39542_c0_seq1
223bp
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007270 P neuron-neuron synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0042331 P phototaxis
GO:0048268 P clathrin coat assembly
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2362 O_BomoMG13774_internal:A_BomoMG_comp39542_c1_seq1
103bp
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007270 P neuron-neuron synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0042331 P phototaxis
GO:0048268 P clathrin coat assembly
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2363 O_BomoMG13775_internal:A_BomoMG_comp39542_c2_seq1
116bp
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007270 P neuron-neuron synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0042331 P phototaxis
GO:0048268 P clathrin coat assembly
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:2000370 P positive regulation of clathrin-dependent endocytosis
2364 O_BomoMG13777_5prime_partial:A_BomoMG_comp39543_c0_seq1
185bp
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
2365 O_BomoMG13778_complete:A_BomoMG_comp39543_c0_seq2
232bp
GO:0001772 C immunological synapse
GO:0002639 P positive regulation of immunoglobulin production
GO:0002920 P regulation of humoral immune response
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030886 P negative regulation of myeloid dendritic cell activation
GO:0042832 P defense response to protozoan
GO:0050688 P regulation of defense response to virus
GO:0070062 C extracellular exosome
2366 O_BomoMG13779_5prime_partial:A_BomoMG_comp39543_c0_seq2
185bp
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
2367 O_BomoMG13780_5prime_partial:A_BomoMG_comp39543_c0_seq4
185bp
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
2368 O_BomoMG13781_complete:A_BomoMG_comp39543_c0_seq6
227bp
GO:0001772 C immunological synapse
GO:0002639 P positive regulation of immunoglobulin production
GO:0002920 P regulation of humoral immune response
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030886 P negative regulation of myeloid dendritic cell activation
GO:0042832 P defense response to protozoan
GO:0050688 P regulation of defense response to virus
GO:0070062 C extracellular exosome
2369 O_BomoMG13782_complete:A_BomoMG_comp39545_c0_seq1
603bp
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
2370 O_BomoMG13783_complete:A_BomoMG_comp39545_c0_seq2
452bp
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
previous next from show/16985

- SilkBase 1999-2023 -