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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2401 O_BomoMG13831_internal:A_BomoMG_comp39557_c0_seq1
231bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2402 O_BomoMG13832_internal:A_BomoMG_comp39557_c0_seq2
222bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2403 O_BomoMG13833_5prime_partial:A_BomoMG_comp39557_c1_seq1
413bp
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2404 O_BomoMG13834_5prime_partial:A_BomoMG_comp39557_c1_seq1
248bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0097602 F cullin family protein binding
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
2405 O_BomoMG13835_5prime_partial:A_BomoMG_comp39557_c1_seq2
413bp
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2406 O_BomoMG13836_5prime_partial:A_BomoMG_comp39557_c1_seq2
248bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0097602 F cullin family protein binding
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
2407 O_BomoMG13837_internal:A_BomoMG_comp39558_c0_seq1
209bp
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0055114 P obsolete oxidation-reduction process
2408 O_BomoMG13839_5prime_partial:A_BomoMG_comp39559_c0_seq1
811bp
2409 O_BomoMG13841_internal:A_BomoMG_comp39559_c1_seq1
518bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
2410 O_BomoMG13843_3prime_partial:A_BomoMG_comp39560_c0_seq1
169bp
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0015031 P protein transport
GO:0019901 F protein kinase binding
GO:0030276 F clathrin binding
GO:0045839 P negative regulation of mitotic nuclear division
GO:0070062 C extracellular exosome
2411 O_BomoMG13844_complete:A_BomoMG_comp39560_c0_seq2
489bp
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0015031 P protein transport
GO:0019901 F protein kinase binding
GO:0030276 F clathrin binding
GO:0045839 P negative regulation of mitotic nuclear division
GO:0070062 C extracellular exosome
2412 O_BomoMG13848_5prime_partial:A_BomoMG_comp39561_c0_seq2
404bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006046 P N-acetylglucosamine catabolic process
GO:0008150 P biological_process
GO:0008448 F N-acetylglucosamine-6-phosphate deacetylase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 F metal ion binding
2413 O_BomoMG1384_complete:A_BomoMG_comp20226_c0_seq1
151bp
 PREDICTED:_myosin_light_chain_alkali_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005859 C muscle myosin complex
GO:0016459 C myosin complex
2414 O_BomoMG13850_internal:A_BomoMG_comp39562_c0_seq2
112bp
GO:0004582 F dolichyl-phosphate beta-D-mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006486 P protein glycosylation
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0097502 P mannosylation
2415 O_BomoMG13852_3prime_partial:A_BomoMG_comp39564_c1_seq1
145bp
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006906 P vesicle fusion
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0048193 P Golgi vesicle transport
GO:0048209 P regulation of vesicle targeting, to, from or within Golgi
2416 O_BomoMG13853_5prime_partial:A_BomoMG_comp39565_c0_seq1
195bp
2417 O_BomoMG13855_5prime_partial:A_BomoMG_comp39566_c0_seq1
100bp
2418 O_BomoMG13856_5prime_partial:A_BomoMG_comp39567_c0_seq1
241bp
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
2419 O_BomoMG13858_internal:A_BomoMG_comp39568_c0_seq1
526bp
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
2420 O_BomoMG13859_3prime_partial:A_BomoMG_comp39568_c0_seq2
522bp
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
2421 O_BomoMG1385_internal:A_BomoMG_comp20227_c0_seq1
863bp
 PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0046872 F metal ion binding
GO:0051693 P actin filament capping
2422 O_BomoMG13860_5prime_partial:A_BomoMG_comp39569_c0_seq1
149bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
2423 O_BomoMG13861_3prime_partial:A_BomoMG_comp39569_c1_seq2
476bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
2424 O_BomoMG13862_3prime_partial:A_BomoMG_comp39569_c1_seq3
176bp
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
2425 O_BomoMG13863_complete:A_BomoMG_comp39570_c0_seq1
480bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016223 F beta-alanine-pyruvate transaminase activity
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0046487 P glyoxylate metabolic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
2426 O_BomoMG13865_5prime_partial:A_BomoMG_comp39571_c0_seq1
142bp
2427 O_BomoMG13866_5prime_partial:A_BomoMG_comp39572_c0_seq1
167bp
2428 O_BomoMG13867_5prime_partial:A_BomoMG_comp39572_c0_seq2
114bp
2429 O_BomoMG13868_5prime_partial:A_BomoMG_comp39573_c0_seq1
530bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008536 F small GTPase binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
2430 O_BomoMG13870_5prime_partial:A_BomoMG_comp39573_c0_seq3
389bp
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008536 F small GTPase binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
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