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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1381 O_BomoMG12129_complete:A_BomoMG_comp39011_c0_seq1
553bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_SOWAHB_isoform_X2_[Papilio_xuthus]
1382 O_BomoMG12132_complete:A_BomoMG_comp39011_c0_seq2
563bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_SOWAHB_isoform_X2_[Papilio_xuthus]
1383 O_BomoMG12135_complete:A_BomoMG_comp39011_c0_seq3
526bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_SOWAHB_isoform_X2_[Papilio_xuthus]
1384 O_BomoMG12137_complete:A_BomoMG_comp39012_c0_seq1
365bp
 vrille_[Antheraea_pernyi]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006955 P immune response
GO:0007507 P heart development
GO:0007623 P circadian rhythm
GO:0043565 F sequence-specific DNA binding
GO:0048511 P rhythmic process
GO:0061515 P myeloid cell development
1385 O_BomoMG12138_complete:A_BomoMG_comp39015_c0_seq1
412bp
 exuperantia_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0007275 P multicellular organism development
1386 O_BomoMG1213_5prime_partial:A_BomoMG_comp20022_c0_seq2
132bp
 hypothetical_protein_PCYB_051520_[Plasmodium_cynomolgi_strain_B]
1387 O_BomoMG12140_internal:A_BomoMG_comp39017_c0_seq1
389bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
1388 O_BomoMG12144_5prime_partial:A_BomoMG_comp39017_c0_seq4
268bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
1389 O_BomoMG12146_3prime_partial:A_BomoMG_comp39017_c0_seq5
165bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
1390 O_BomoMG12148_3prime_partial:A_BomoMG_comp39017_c1_seq1
175bp
 PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
1391 O_BomoMG12149_3prime_partial:A_BomoMG_comp39020_c0_seq1
275bp
 General_transcription_factor_3C_polypeptide_1_[Papilio_xuthus]
1392 O_BomoMG12150_internal:A_BomoMG_comp39020_c0_seq2
893bp
 Transcription_factor_TFIIICalfa_[Operophtera_brumata]
1393 O_BomoMG12151_complete:A_BomoMG_comp39021_c0_seq1
254bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
1394 O_BomoMG12152_complete:A_BomoMG_comp39021_c0_seq2
342bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
1395 O_BomoMG12153_complete:A_BomoMG_comp39022_c0_seq1
733bp
 glycine--tRNA_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004820 F glycine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006426 P glycyl-tRNA aminoacylation
GO:0015966 P diadenosine tetraphosphate biosynthetic process
GO:0016874 F ligase activity
GO:0046983 F protein dimerization activity
1396 O_BomoMG12154_3prime_partial:A_BomoMG_comp39023_c0_seq1
555bp
 PREDICTED:_uncharacterized_protein_LOC101740721_[Bombyx_mori]
GO:0001172 P transcription, RNA-templated
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0019079 P viral genome replication
GO:0019082 P viral protein processing
GO:0030430 C host cell cytoplasm
GO:0030683 P mitigation of host immune response by virus
GO:0033644 C host cell membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0039502 P suppression by virus of host type I interferon-mediated signaling pathway
GO:0039503 P suppression by virus of host innate immune response
GO:0039520 P induction by virus of host autophagy
GO:0039548 P suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity
GO:0039579 P suppression by virus of host ISG15-protein conjugation
GO:0039595 P induction by virus of catabolism of host mRNA
GO:0039648 P modulation by virus of host protein ubiquitination
GO:0039657 P suppression by virus of host gene expression
GO:0044220 C host cell perinuclear region of cytoplasm
GO:0046872 F metal ion binding
1397 O_BomoMG12157_complete:A_BomoMG_comp39023_c0_seq2
252bp
 PREDICTED:_uncharacterized_protein_LOC101740721_[Bombyx_mori]
1398 O_BomoMG12158_3prime_partial:A_BomoMG_comp39023_c0_seq4
681bp
 PREDICTED:_uncharacterized_protein_LOC101740721_[Bombyx_mori]
GO:0001172 P transcription, RNA-templated
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0019079 P viral genome replication
GO:0019082 P viral protein processing
GO:0030430 C host cell cytoplasm
GO:0030683 P mitigation of host immune response by virus
GO:0033644 C host cell membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0039502 P suppression by virus of host type I interferon-mediated signaling pathway
GO:0039503 P suppression by virus of host innate immune response
GO:0039520 P induction by virus of host autophagy
GO:0039548 P suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity
GO:0039579 P suppression by virus of host ISG15-protein conjugation
GO:0039595 P induction by virus of catabolism of host mRNA
GO:0039648 P modulation by virus of host protein ubiquitination
GO:0039657 P suppression by virus of host gene expression
GO:0044220 C host cell perinuclear region of cytoplasm
GO:0046872 F metal ion binding
1399 O_BomoMG1215_complete:A_BomoMG_comp20027_c0_seq1
595bp
 PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_8_[Plutella_xylostella]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1400 O_BomoMG12165_internal:A_BomoMG_comp39024_c0_seq1
258bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
1401 O_BomoMG12166_internal:A_BomoMG_comp39024_c0_seq2
206bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR4_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
1402 O_BomoMG12167_internal:A_BomoMG_comp39024_c0_seq3
537bp
 PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
1403 O_BomoMG12168_5prime_partial:A_BomoMG_comp39024_c0_seq4
362bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
1404 O_BomoMG12169_5prime_partial:A_BomoMG_comp39024_c0_seq4
109bp
 LuxR_family_transcriptional_regulator_[Streptomyces_sp._150FB]
1405 O_BomoMG12170_internal:A_BomoMG_comp39024_c1_seq1
735bp
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
1406 O_BomoMG12174_complete:A_BomoMG_comp39026_c3_seq1
102bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1407 O_BomoMG12175_complete:A_BomoMG_comp39026_c3_seq2
102bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
1408 O_BomoMG12176_3prime_partial:A_BomoMG_comp39027_c0_seq1
433bp
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
1409 O_BomoMG12178_complete:A_BomoMG_comp39027_c0_seq1
137bp
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
1410 O_BomoMG12179_5prime_partial:A_BomoMG_comp39027_c0_seq2
944bp
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