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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1171 O_BomoMG11795_complete:A_BomoMG_comp38875_c0_seq3
237bp
 PREDICTED:_rab-related_protein_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019882 P antigen processing and presentation
GO:0030670 C phagocytic vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0031905 C early endosome lumen
GO:0035612 F AP-2 adaptor complex binding
GO:0035646 P endosome to melanosome transport
GO:0035650 F AP-1 adaptor complex binding
GO:0035651 F AP-3 adaptor complex binding
GO:0036461 F BLOC-2 complex binding
GO:0042470 C melanosome
GO:0045335 C phagocytic vesicle
GO:0090382 P phagosome maturation
GO:1903232 P melanosome assembly
1172 O_BomoMG11796_complete:A_BomoMG_comp38876_c0_seq1
402bp
 PREDICTED:_glucose-fructose_oxidoreductase_domain-containing_protein_1_[Amyelois_transitella]
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
1173 O_BomoMG11797_complete:A_BomoMG_comp38876_c0_seq1
104bp
 putative_10_kDa_heat_shock_protein_[Danaus_plexippus]
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006457 P protein folding
1174 O_BomoMG11798_5prime_partial:A_BomoMG_comp38878_c1_seq1
129bp
 PREDICTED:_protein_sel-1_homolog_2_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1175 O_BomoMG1179_5prime_partial:A_BomoMG_comp19975_c0_seq2
390bp
 PREDICTED:_tetracycline_resistance_protein,_class_D-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1176 O_BomoMG117_internal:A_BomoMG_comp17221_c0_seq1
119bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
1177 O_BomoMG11800_5prime_partial:A_BomoMG_comp38878_c1_seq2
127bp
 PREDICTED:_protein_sel-1_homolog_1_isoform_X2_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1178 O_BomoMG11801_3prime_partial:A_BomoMG_comp38881_c0_seq2
462bp
 PREDICTED:_protein_Skeletor,_isoforms_B/C_[Bombyx_mori]
GO:0004500 F dopamine beta-monooxygenase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006584 P catecholamine metabolic process
GO:0006997 P nucleus organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016363 C nuclear matrix
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0055114 P obsolete oxidation-reduction process
1179 O_BomoMG11803_5prime_partial:A_BomoMG_comp38882_c1_seq2
180bp
 Pumilio_domain-containing_protein_C14orf21-like_[Papilio_machaon]
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0044822 F RNA binding
1180 O_BomoMG11804_internal:A_BomoMG_comp38882_c2_seq1
199bp
 PREDICTED:_nucleolar_protein_9_isoform_X1_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0044822 F RNA binding
1181 O_BomoMG11806_3prime_partial:A_BomoMG_comp38883_c0_seq1
318bp
 PREDICTED:_metastasis-associated_protein_MTA3_[Papilio_machaon]
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007565 P female pregnancy
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016023 C cytoplasmic vesicle
GO:0019899 F enzyme binding
GO:0031410 C cytoplasmic vesicle
GO:0032496 P response to lipopolysaccharide
GO:0032922 P circadian regulation of gene expression
GO:0033363 P secretory granule organization
GO:0040029 P regulation of gene expression, epigenetic
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043565 F sequence-specific DNA binding
GO:0045475 P locomotor rhythm
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0050727 P regulation of inflammatory response
GO:1902499 P positive regulation of protein autoubiquitination
GO:1903507 P negative regulation of nucleic acid-templated transcription
1182 O_BomoMG11808_internal:A_BomoMG_comp38883_c0_seq2
351bp
 PREDICTED:_metastasis-associated_protein_MTA3_[Papilio_machaon]
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007565 P female pregnancy
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016023 C cytoplasmic vesicle
GO:0019899 F enzyme binding
GO:0031410 C cytoplasmic vesicle
GO:0032496 P response to lipopolysaccharide
GO:0032922 P circadian regulation of gene expression
GO:0033363 P secretory granule organization
GO:0040029 P regulation of gene expression, epigenetic
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043565 F sequence-specific DNA binding
GO:0045475 P locomotor rhythm
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0050727 P regulation of inflammatory response
GO:1902499 P positive regulation of protein autoubiquitination
GO:1903507 P negative regulation of nucleic acid-templated transcription
1183 O_BomoMG1180_complete:A_BomoMG_comp19981_c0_seq1
409bp
 PREDICTED:_STAM-binding_protein-like_A_[Amyelois_transitella]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1184 O_BomoMG11810_3prime_partial:A_BomoMG_comp38883_c0_seq3
233bp
 PREDICTED:_metastasis-associated_protein_MTA3_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1185 O_BomoMG11811_3prime_partial:A_BomoMG_comp38884_c0_seq1
367bp
 PREDICTED:_uncharacterized_protein_LOC101745890_isoform_X1_[Bombyx_mori]
1186 O_BomoMG11813_internal:A_BomoMG_comp38885_c0_seq1
245bp
 PREDICTED:_uncharacterized_protein_LOC101743924_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045860 P positive regulation of protein kinase activity
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
1187 O_BomoMG11815_3prime_partial:A_BomoMG_comp38885_c1_seq1
341bp
 PREDICTED:_uncharacterized_protein_LOC101743924_isoform_X2_[Bombyx_mori]
1188 O_BomoMG11816_internal:A_BomoMG_comp38886_c0_seq1
165bp
 PREDICTED:_uncharacterized_protein_LOC101737914_isoform_X2_[Bombyx_mori]
1189 O_BomoMG11817_complete:A_BomoMG_comp38888_c0_seq1
606bp
 PREDICTED:_SET_and_MYND_domain-containing_protein_4_[Amyelois_transitella]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
1190 O_BomoMG11818_complete:A_BomoMG_comp38889_c0_seq1
365bp
 PREDICTED:_STE20-related_kinase_adapter_protein_alpha_isoform_X2_[Papilio_machaon]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006611 P protein export from nucleus
GO:0007049 P cell cycle
GO:0030295 F protein kinase activator activity
GO:0032147 P activation of protein kinase activity
1191 O_BomoMG1181_complete:A_BomoMG_comp19982_c0_seq1
454bp
 F-box/LRR-repeat_protein_16_[Papilio_xuthus]
GO:0005737 C cytoplasm
1192 O_BomoMG11820_internal:A_BomoMG_comp38892_c0_seq1
142bp
 nucleostemin_3_[Papilio_xuthus]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0009267 P cellular response to starvation
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016787 F hydrolase activity
GO:0040008 P regulation of growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0051168 P nuclear export
1193 O_BomoMG11821_5prime_partial:A_BomoMG_comp38892_c0_seq2
102bp
 nucleostemin_3_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0051168 P nuclear export
1194 O_BomoMG11822_3prime_partial:A_BomoMG_comp38892_c0_seq3
539bp
 Large_subunit_GTPase_1-like_[Papilio_xuthus]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0009267 P cellular response to starvation
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016787 F hydrolase activity
GO:0040008 P regulation of growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0046626 P regulation of insulin receptor signaling pathway
GO:0051168 P nuclear export
1195 O_BomoMG11825_5prime_partial:A_BomoMG_comp38894_c0_seq1
370bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
1196 O_BomoMG11827_internal:A_BomoMG_comp38894_c0_seq2
582bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
1197 O_BomoMG11829_internal:A_BomoMG_comp38894_c0_seq3
600bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
1198 O_BomoMG11831_complete:A_BomoMG_comp38896_c0_seq1
332bp
 PREDICTED:_sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1199 O_BomoMG11832_internal:A_BomoMG_comp38897_c0_seq1
255bp
 PREDICTED:_tyrosine-protein_kinase_Abl_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
1200 O_BomoMG11835_5prime_partial:A_BomoMG_comp38897_c0_seq2
468bp
 PREDICTED:_tyrosine-protein_kinase_Abl_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
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