Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
10441	O_BomoMG28035_internal:A_BomoMG_comp132989_c0_seq1 128bp	Bomo_Chr12	PREDICTED:_transportin-3-like_[Bombyx_mori]	GO:0004872 F signaling receptor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006810 P transport GO:0008139 F nuclear localization sequence binding GO:0008565 F obsolete protein transporter activity GO:0015031 P protein transport GO:0031965 C nuclear membrane GO:0035048 P obsolete splicing factor protein import into nucleus GO:0042802 F identical protein binding GO:0043231 C intracellular membrane-bounded organelle
10442	O_BomoMG28038_complete:A_BomoMG_comp133023_c0_seq1 342bp	Bomo_Chr23	activator_of_90_kDa_heat_shock_protein_ATPase_homolog_1_[Bombyx_mori]	GO:0001671 F ATPase activator activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005829 C cytosol GO:0006950 P response to stress GO:0032781 P positive regulation of ATP-dependent activity GO:0051087 F chaperone binding GO:0070062 C extracellular exosome
10443	O_BomoMG28039_complete:A_BomoMG_comp133129_c0_seq1 181bp	Bomo_Chr24	PREDICTED:_60S_ribosome_subunit_biogenesis_protein_NIP7_homolog_[Amyelois_transitella]	GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0042254 P ribosome biogenesis GO:0042255 P ribosome assembly
10444	O_BomoMG2803_3prime_partial:A_BomoMG_comp22406_c0_seq1 371bp	Bomo_Chr3	PREDICTED:_protein_transport_protein_Sec31A_[Papilio_xuthus]	GO:0005737 C cytoplasm GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0006810 P transport GO:0012507 C ER to Golgi transport vesicle membrane GO:0015031 P protein transport GO:0016020 C membrane GO:0016192 P vesicle-mediated transport GO:0030134 C COPII-coated ER to Golgi transport vesicle GO:0031410 C cytoplasmic vesicle
10445	O_BomoMG28040_complete:A_BomoMG_comp133132_c0_seq1 599bp	Bomo_Chr8	replication_protein_A1_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0005634 C nucleus GO:0005662 C DNA replication factor A complex GO:0005875 C microtubule associated complex GO:0006260 P DNA replication GO:0006261 P DNA-dependent DNA replication GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0007052 P mitotic spindle organization GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding GO:0048812 P neuron projection morphogenesis
10446	O_BomoMG28041_5prime_partial:A_BomoMG_comp133143_c0_seq1 300bp	Bomo_Chr25	PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_6_isoform_X1_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0016592 C mediator complex GO:0051123 P RNA polymerase II preinitiation complex assembly GO:0070847 C core mediator complex
10447	O_BomoMG28042_internal:A_BomoMG_comp133418_c0_seq1 1099bp	Bomo_Chr4	PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]	GO:0001558 P regulation of cell growth GO:0005515 F protein binding GO:0005634 C nucleus GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030856 P regulation of epithelial cell differentiation
10448	O_BomoMG28044_5prime_partial:A_BomoMG_comp133727_c0_seq1 410bp	Bomo_Chr19	AF361483_1_chymotrypsin_inhibitor_CI-8A_[Bombyx_mori]	GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity
10449	O_BomoMG28046_3prime_partial:A_BomoMG_comp133921_c0_seq1 303bp	Bomo_Chr19	PREDICTED:_enhancer_of_mRNA-decapping_protein_3,_partial_[Bombyx_mori]	GO:0000932 C P-body GO:0003723 F RNA binding GO:0003729 F mRNA binding GO:0005737 C cytoplasm GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA GO:0033962 P P-body assembly GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic GO:1990174 F phosphodiesterase decapping endonuclease activity
10450	O_BomoMG28047_internal:A_BomoMG_comp134108_c0_seq1 103bp	Bomo_Chr14	putative_RW1_protein_[Danaus_plexippus]	GO:0003674 F molecular_function GO:0008150 P biological_process GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane
10451	O_BomoMG28051_internal:A_BomoMG_comp134359_c0_seq1 103bp	Bomo_Chr21	Ral_GTPase-activating_protein_subunit_beta_[Papilio_xuthus]	GO:0005096 F GTPase activator activity GO:0046982 F protein heterodimerization activity GO:0051056 P regulation of small GTPase mediated signal transduction GO:0090630 P activation of GTPase activity
10452	O_BomoMG28053_internal:A_BomoMG_comp134670_c0_seq1 189bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]
10453	O_BomoMG28056_internal:A_BomoMG_comp135574_c0_seq1 149bp	Bomo_Chr20	putative_importin_[Danaus_plexippus]	GO:0005049 F nuclear export signal receptor activity GO:0005634 C nucleus GO:0005635 C nuclear envelope GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006606 P protein import into nucleus GO:0006611 P protein export from nucleus GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0006909 P phagocytosis GO:0008536 F small GTPase binding GO:0015031 P protein transport GO:0022008 P neurogenesis GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
10454	O_BomoMG28057_complete:A_BomoMG_comp135649_c0_seq1 155bp	Bomo_Chr6	PREDICTED:_uncharacterized_protein_LOC101735342_[Bombyx_mori]	GO:0005179 F hormone activity GO:0005184 F neuropeptide hormone activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0007218 P neuropeptide signaling pathway
10455	O_BomoMG28058_complete:A_BomoMG_comp135718_c0_seq1 166bp	Bomo_Chr3	PREDICTED:_UPF0047_protein_YjbQ_[Papilio_polytes]
10456	O_BomoMG28061_internal:A_BomoMG_comp135737_c0_seq1 107bp	Bomo_Chr11	PREDICTED:_uncharacterized_protein_LOC101739152_isoform_X3_[Bombyx_mori]
10457	O_BomoMG28062_5prime_partial:A_BomoMG_comp136102_c0_seq1 150bp	Bomo_Chr27	PREDICTED:_uncharacterized_protein_LOC101738114_isoform_X2_[Bombyx_mori]
10458	O_BomoMG28063_5prime_partial:A_BomoMG_comp136189_c0_seq1 185bp	Bomo_Chr3	PREDICTED:_F-box/LRR-repeat_protein_15_[Bombyx_mori]	GO:0000086 P G2/M transition of mitotic cell cycle GO:0004842 F ubiquitin-protein transferase activity GO:0005737 C cytoplasm GO:0009953 P dorsal/ventral pattern formation GO:0016567 P protein ubiquitination GO:0019005 C SCF ubiquitin ligase complex GO:0030282 P bone mineralization GO:0030513 P positive regulation of BMP signaling pathway GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
10459	O_BomoMG28064_5prime_partial:A_BomoMG_comp136271_c0_seq1 157bp	Bomo_Chr15	PREDICTED:_uncharacterized_protein_LOC106111152_[Papilio_polytes]	GO:0000724 P double-strand break repair via homologous recombination GO:0000729 P DNA double-strand break processing GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006139 P nucleobase-containing compound metabolic process GO:0006302 P double-strand break repair GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity GO:0008408 F 3'-5' exonuclease activity GO:0008852 F exodeoxyribonuclease I activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10460	O_BomoMG28065_5prime_partial:A_BomoMG_comp136384_c0_seq1 315bp	Bomo_Chr13	PREDICTED:_transcriptional_adapter_1-like_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0070461 C SAGA-type complex
10461	O_BomoMG28066_internal:A_BomoMG_comp136394_c0_seq1 365bp	Bomo_Chr7	PREDICTED:_UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]	GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0016758 F hexosyltransferase activity
10462	O_BomoMG28068_5prime_partial:A_BomoMG_comp136853_c0_seq1 727bp	Bomo_Chr25	PREDICTED:_exocyst_complex_component_5_isoform_X1_[Papilio_machaon]	GO:0000145 C exocyst GO:0005737 C cytoplasm GO:0006810 P transport GO:0006887 P exocytosis GO:0007269 P neurotransmitter secretion GO:0008013 F beta-catenin binding GO:0015031 P protein transport GO:0016080 P synaptic vesicle targeting GO:0016081 P synaptic vesicle docking GO:0016192 P vesicle-mediated transport GO:0048278 P vesicle docking GO:0090522 P vesicle tethering involved in exocytosis GO:0098793 C presynapse
10463	O_BomoMG2806_internal:A_BomoMG_comp22414_c0_seq1 194bp	Bomo_Chr23	Ribosomal_RNA_processing_protein_1-like_[Papilio_xuthus]	GO:0000022 P mitotic spindle elongation GO:0005634 C nucleus GO:0006364 P rRNA processing GO:0016072 P rRNA metabolic process GO:0030687 C preribosome, large subunit precursor GO:0030688 C preribosome, small subunit precursor
10464	O_BomoMG28070_complete:A_BomoMG_comp137119_c0_seq1 301bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC105390855_[Plutella_xylostella]	GO:0000287 F magnesium ion binding GO:0003676 F nucleic acid binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0005634 C nucleus GO:0006259 P DNA metabolic process GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0008296 F 3'-5'-exodeoxyribonuclease activity GO:0008853 F exodeoxyribonuclease III activity GO:0016787 F hydrolase activity GO:0042803 F protein homodimerization activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10465	O_BomoMG28072_complete:A_BomoMG_comp137309_c0_seq1 141bp	Bomo_Chr7	hypothetical_protein_KGM_02361_[Danaus_plexippus]
10466	O_BomoMG28073_3prime_partial:A_BomoMG_comp137333_c0_seq1 109bp	Bomo_Chr24	hypothetical_protein_EPUS_04647_[Endocarpon_pusillum_Z07020]
10467	O_BomoMG28074_5prime_partial:A_BomoMG_comp137439_c0_seq1 170bp	Bomo_Chr1	acyl-CoA_thioesterase_13_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005819 C spindle GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0008152 P metabolic process GO:0016787 F hydrolase activity GO:0047617 F acyl-CoA hydrolase activity GO:0051289 P protein homotetramerization GO:0070062 C extracellular exosome
10468	O_BomoMG28075_complete:A_BomoMG_comp137574_c0_seq1 267bp	Bomo_Chr11	putative_ankyrin_repeat_domain_54_[Danaus_plexippus]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006913 P nucleocytoplasmic transport GO:0019887 F protein kinase regulator activity GO:0030496 C midbody GO:0032403 F protein-containing complex binding GO:0045648 P positive regulation of erythrocyte differentiation GO:0045859 P regulation of protein kinase activity GO:1902531 P regulation of intracellular signal transduction
10469	O_BomoMG28076_complete:A_BomoMG_comp137604_c0_seq1 557bp	Bomo_Chr11	PREDICTED:_uridine-cytidine_kinase-like_1_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004849 F uridine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006206 P pyrimidine nucleobase metabolic process GO:0008152 P metabolic process GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0043097 P pyrimidine nucleoside salvage GO:0044206 P UMP salvage
10470	O_BomoMG28077_complete:A_BomoMG_comp137652_c0_seq1 127bp	Bomo_Chr5	14_kDa_subunit_splicing_factor_3b_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000398 P mRNA splicing, via spliceosome GO:0001825 P blastocyst formation GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005684 C U2-type spliceosomal complex GO:0005686 C U2 snRNP GO:0005689 C U12-type spliceosomal complex GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0044822 F RNA binding GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome