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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10471 O_BomoMG28078_complete:A_BomoMG_comp138041_c0_seq1
362bp
 Box_C/D_snoRNA_protein_1_[Operophtera_brumata]
GO:0042254 P ribosome biogenesis
GO:0046872 F metal ion binding
10472 O_BomoMG28079_complete:A_BomoMG_comp138101_c0_seq1
126bp
 Uncharacterized_protein_OBRU01_10972_[Operophtera_brumata]
GO:0008276 F protein methyltransferase activity
GO:0018364 P peptidyl-glutamine methylation
GO:0030488 P tRNA methylation
GO:0043234 C protein-containing complex
GO:0070062 C extracellular exosome
GO:0070476 P rRNA (guanine-N7)-methylation
10473 O_BomoMG28080_complete:A_BomoMG_comp138645_c0_seq1
438bp
 PREDICTED:_nuclear_receptor_coactivator_5_[Amyelois_transitella]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0015629 C actin cytoskeleton
GO:0042593 P glucose homeostasis
GO:0044822 F RNA binding
GO:0046627 P negative regulation of insulin receptor signaling pathway
10474 O_BomoMG28081_complete:A_BomoMG_comp138939_c0_seq1
157bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_T-like_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0035519 P protein K29-linked ubiquitination
GO:0036297 P interstrand cross-link repair
GO:0044314 P protein K27-linked ubiquitination
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
10475 O_BomoMG28082_complete:A_BomoMG_comp138958_c0_seq1
251bp
 PREDICTED:_circadian_clock-controlled_protein-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
10476 O_BomoMG28083_internal:A_BomoMG_comp139084_c0_seq1
172bp
 PREDICTED:_nuclear_pore_complex_protein_Nup205-like_[Plutella_xylostella]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
10477 O_BomoMG28085_5prime_partial:A_BomoMG_comp139089_c0_seq1
282bp
 PREDICTED:_metaxin-2_isoform_X2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0015031 P protein transport
GO:0016020 C membrane
10478 O_BomoMG28086_3prime_partial:A_BomoMG_comp139155_c0_seq1
209bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_13B-like,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
10479 O_BomoMG28087_complete:A_BomoMG_comp139187_c0_seq1
285bp
 PREDICTED:_OTU_domain-containing_protein_6B_[Plutella_xylostella]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
10480 O_BomoMG28088_5prime_partial:A_BomoMG_comp139288_c0_seq1
126bp
 PREDICTED:_uncharacterized_protein_LOC106124142_[Papilio_xuthus]
10481 O_BomoMG28089_5prime_partial:A_BomoMG_comp139472_c0_seq1
495bp
 PREDICTED:_serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
10482 O_BomoMG2808_3prime_partial:A_BomoMG_comp22414_c0_seq2
136bp
 PREDICTED:_ribosomal_RNA_processing_protein_1_homolog_[Papilio_xuthus]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
10483 O_BomoMG28090_5prime_partial:A_BomoMG_comp139616_c0_seq1
148bp
 PREDICTED:_integrator_complex_subunit_5_[Amyelois_transitella]
10484 O_BomoMG28091_3prime_partial:A_BomoMG_comp139745_c0_seq1
390bp
 PREDICTED:_pseudouridylate_synthase_7_homolog_[Plutella_xylostella]
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0019899 F enzyme binding
GO:0044822 F RNA binding
10485 O_BomoMG28094_5prime_partial:A_BomoMG_comp139993_c0_seq1
387bp
 PREDICTED:_CAD_protein_isoform_X1_[Papilio_machaon]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
10486 O_BomoMG28096_internal:A_BomoMG_comp140233_c0_seq1
181bp
10487 O_BomoMG28098_complete:A_BomoMG_comp140416_c0_seq1
129bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_guanine_nucleotide_exchange_factor_MSS4_homolog_[Papilio_machaon]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
10488 O_BomoMG28099_5prime_partial:A_BomoMG_comp140871_c0_seq1
371bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_calcium-transporting_ATPase_type_2C_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004871 F obsolete signal transducer activity
GO:0005388 F P-type calcium transporter activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006828 P manganese ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0008544 P epidermis development
GO:0015410 F ABC-type manganese transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016787 F hydrolase activity
GO:0030026 P cellular manganese ion homeostasis
GO:0030145 F manganese ion binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032468 P Golgi calcium ion homeostasis
GO:0032472 P Golgi calcium ion transport
GO:0034220 P ion transmembrane transport
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:0071421 P manganese ion transmembrane transport
10489 O_BomoMG2809_5prime_partial:A_BomoMG_comp22420_c0_seq1
448bp
 PREDICTED:_homeobox_protein_5_isoform_X2_[Bombyx_mori]
GO:0046872 F metal ion binding
10490 O_BomoMG28103_complete:A_BomoMG_comp141594_c0_seq1
129bp
 PREDICTED:_chemosensory_protein_10_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007552 P metamorphosis
GO:0007610 P behavior
GO:0009615 P response to virus
GO:0045297 P obsolete post-mating behavior
10491 O_BomoMG28104_3prime_partial:A_BomoMG_comp141631_c0_seq1
221bp
 PREDICTED:_arfaptin-2_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0019904 F protein domain specific binding
GO:0032588 C trans-Golgi network membrane
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0050708 P regulation of protein secretion
GO:0070273 F phosphatidylinositol-4-phosphate binding
10492 O_BomoMG28107_internal:A_BomoMG_comp142525_c0_seq1
129bp
 PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
10493 O_BomoMG28109_internal:A_BomoMG_comp142728_c0_seq1
443bp
 PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
10494 O_BomoMG28111_5prime_partial:A_BomoMG_comp143198_c0_seq1
111bp
 PREDICTED:_protein_Skeletor,_isoforms_B/C_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006997 P nucleus organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016363 C nuclear matrix
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
10495 O_BomoMG28112_3prime_partial:A_BomoMG_comp143243_c0_seq1
429bp
 PREDICTED:_patj_homolog_isoform_X1_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
10496 O_BomoMG28113_5prime_partial:A_BomoMG_comp143381_c0_seq1
334bp
 PREDICTED:_S-phase_kinase-associated_protein_2-like_[Papilio_polytes]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051726 P regulation of cell cycle
GO:0061630 F ubiquitin protein ligase activity
GO:0071460 P cellular response to cell-matrix adhesion
GO:1902916 P positive regulation of protein polyubiquitination
10497 O_BomoMG28115_3prime_partial:A_BomoMG_comp143598_c0_seq1
386bp
 PREDICTED:_cell_division_control_protein_45_homolog_[Papilio_machaon]
GO:0000076 P DNA replication checkpoint signaling
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000083 P regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000727 P double-strand break repair via break-induced replication
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005656 C nuclear pre-replicative complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0031261 C DNA replication preinitiation complex
GO:0031298 C replication fork protection complex
GO:0031938 P obsolete regulation of chromatin silencing at telomere
GO:0032508 P DNA duplex unwinding
GO:0043138 F 3'-5' DNA helicase activity
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1902977 P mitotic DNA replication preinitiation complex assembly
10498 O_BomoMG28116_internal:A_BomoMG_comp143728_c0_seq1
351bp
 PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Papilio_xuthus]
GO:0000027 P ribosomal large subunit assembly
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
10499 O_BomoMG28117_5prime_partial:A_BomoMG_comp144037_c0_seq1
333bp
 PREDICTED:_ribosomal_RNA_processing_protein_1_homolog_[Papilio_polytes]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
10500 O_BomoMG28119_3prime_partial:A_BomoMG_comp144065_c0_seq1
301bp
 PREDICTED:_crossover_junction_endonuclease_EME1_[Papilio_polytes]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005720 C heterochromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0072429 P response to intra-S DNA damage checkpoint signaling
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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