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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10351 O_BomoMG27907_complete:A_BomoMG_comp114549_c0_seq1
161bp
 putative_mitochondrial_ribosomal_protein_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
10352 O_BomoMG27908_complete:A_BomoMG_comp114713_c0_seq1
489bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_lethal(2)neighbour_of_tid_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016758 F hexosyltransferase activity
10353 O_BomoMG27909_complete:A_BomoMG_comp114989_c0_seq1
654bp
 PREDICTED:_protein-methionine_sulfoxide_oxidase_mical3a_isoform_X1_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0030054 C cell junction
GO:0030835 P negative regulation of actin filament depolymerization
GO:0031529 P ruffle organization
GO:0032154 C cleavage furrow
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
10354 O_BomoMG27912_complete:A_BomoMG_comp115053_c0_seq1
287bp
 PREDICTED:_SAP30-binding_protein_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0010942 P positive regulation of cell death
GO:0045111 C intermediate filament cytoskeleton
10355 O_BomoMG27913_internal:A_BomoMG_comp115206_c0_seq1
399bp
 PREDICTED:_nuclear_pore_complex_protein_Nup205_[Papilio_xuthus]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
10356 O_BomoMG27917_complete:A_BomoMG_comp115243_c0_seq1
241bp
 PREDICTED:_uncharacterized_protein_LOC101739177_[Bombyx_mori]
10357 O_BomoMG27920_complete:A_BomoMG_comp115291_c0_seq1
174bp
 PREDICTED:_globin_1_isoform_X1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0004096 F catalase activity
GO:0004601 F peroxidase activity
GO:0005344 F oxygen carrier activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006979 P response to oxidative stress
GO:0010764 P negative regulation of fibroblast migration
GO:0015671 P oxygen transport
GO:0019395 P fatty acid oxidation
GO:0019825 F oxygen binding
GO:0020037 F heme binding
GO:0032966 P negative regulation of collagen biosynthetic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0047888 F fatty acid peroxidase activity
GO:0098869 P cellular oxidant detoxification
GO:2000490 P negative regulation of hepatic stellate cell activation
10358 O_BomoMG27922_complete:A_BomoMG_comp115318_c0_seq1
474bp
 uridine_5'-monophosphate_synthase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004588 F orotate phosphoribosyltransferase activity
GO:0004590 F orotidine-5'-phosphate decarboxylase activity
GO:0005875 C microtubule associated complex
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0008152 P metabolic process
GO:0009116 P nucleoside metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0044205 P 'de novo' UMP biosynthetic process
10359 O_BomoMG27924_5prime_partial:A_BomoMG_comp115433_c0_seq1
483bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
10360 O_BomoMG27927_internal:A_BomoMG_comp115971_c0_seq1
476bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_kurz_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
10361 O_BomoMG27928_5prime_partial:A_BomoMG_comp116243_c0_seq1
156bp
 PREDICTED:_arf-GAP_with_coiled-coil,_ANK_repeat_and_PH_domain-containing_protein_2_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030029 P actin filament-based process
GO:0036010 P protein localization to endosome
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:1990090 P cellular response to nerve growth factor stimulus
10362 O_BomoMG27929_5prime_partial:A_BomoMG_comp116467_c0_seq1
401bp
 PREDICTED:_serine_proteinase-like_protein_isoform_X1_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007010 P cytoskeleton organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016787 F hydrolase activity
GO:0035220 P wing disc development
GO:0051017 P actin filament bundle assembly
10363 O_BomoMG2792_complete:A_BomoMG_comp22376_c0_seq1
530bp
 putative_heat_shock_protein_70_HSP70_interacting_protein_[Danaus_plexippus]
GO:0002020 F protease binding
GO:0004252 F serine-type endopeptidase activity
GO:0005777 C peroxisome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
10364 O_BomoMG27930_5prime_partial:A_BomoMG_comp116467_c0_seq1
393bp
 hypothetical_protein_M153_8924000549_[Pseudoloma_neurophilia]
10365 O_BomoMG27933_complete:A_BomoMG_comp116571_c0_seq1
447bp
 PREDICTED:_DDB1-_and_CUL4-associated_factor_12_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0016567 P protein ubiquitination
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
10366 O_BomoMG27934_5prime_partial:A_BomoMG_comp116671_c0_seq1
112bp
 PREDICTED:_myosuppressin_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
10367 O_BomoMG27935_complete:A_BomoMG_comp117392_c0_seq1
151bp
 PREDICTED:_uncharacterized_protein_LOC106099995_[Papilio_polytes]
GO:0001054 F RNA polymerase I activity
GO:0001055 F RNA polymerase II activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0005666 C RNA polymerase III complex
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0034587 P piRNA metabolic process
10368 O_BomoMG27937_3prime_partial:A_BomoMG_comp117399_c0_seq1
245bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0010623 P programmed cell death involved in cell development
GO:0016491 F oxidoreductase activity
GO:0042775 P mitochondrial ATP synthesis coupled electron transport
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050832 P defense response to fungus
GO:0055114 P obsolete oxidation-reduction process
10369 O_BomoMG27940_5prime_partial:A_BomoMG_comp117554_c0_seq1
603bp
 PREDICTED:_polyphosphoinositide_phosphatase_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007033 P vacuole organization
GO:0007626 P locomotory behavior
GO:0010008 C endosome membrane
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0034593 F phosphatidylinositol bisphosphate phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042578 F phosphoric ester hydrolase activity
GO:0043473 P pigmentation
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0048666 P neuron development
GO:0055037 C recycling endosome
10370 O_BomoMG27943_5prime_partial:A_BomoMG_comp117756_c0_seq1
290bp
 PREDICTED:_probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006457 P protein folding
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
10371 O_BomoMG27944_5prime_partial:A_BomoMG_comp117924_c0_seq1
374bp
 PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
10372 O_BomoMG27945_5prime_partial:A_BomoMG_comp117974_c0_seq1
157bp
 PREDICTED:_serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
10373 O_BomoMG27947_internal:A_BomoMG_comp118627_c0_seq1
236bp
 PREDICTED:_protein_kibra_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0035330 P regulation of hippo signaling
10374 O_BomoMG27949_internal:A_BomoMG_comp118663_c0_seq1
114bp
 hypothetical_protein_KGM_06658_[Danaus_plexippus]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
10375 O_BomoMG27952_3prime_partial:A_BomoMG_comp119608_c0_seq1
509bp
 Cohesin_subunit_SA-1_[Papilio_xuthus]
GO:0000785 C chromatin
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
10376 O_BomoMG27954_complete:A_BomoMG_comp119776_c0_seq1
498bp
 PREDICTED:_cystathionine_beta-synthase-like_[Bombyx_mori]
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
10377 O_BomoMG27955_complete:A_BomoMG_comp119858_c0_seq1
134bp
 PREDICTED:_uncharacterized_protein_LOC101736794_isoform_X1_[Bombyx_mori]
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10378 O_BomoMG27956_5prime_partial:A_BomoMG_comp121834_c0_seq1
179bp
 PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
10379 O_BomoMG27957_complete:A_BomoMG_comp121959_c0_seq1
558bp
 PREDICTED:_guanine_nucleotide-binding_protein-like_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
10380 O_BomoMG27959_complete:A_BomoMG_comp122051_c0_seq1
393bp
 cleavage_stimulation_factor_64-kDa_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
GO:0071920 C cleavage body
GO:0098789 P pre-mRNA cleavage required for polyadenylation
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