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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10321 O_BomoMG27865_3prime_partial:A_BomoMG_comp108357_c0_seq1
514bp
 PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
10322 O_BomoMG27867_5prime_partial:A_BomoMG_comp108486_c0_seq1
330bp
 PREDICTED:_ribosome_production_factor_2_homolog_[Papilio_polytes]
GO:0000027 P ribosomal large subunit assembly
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0051301 P cell division
GO:0090307 P mitotic spindle assembly
10323 O_BomoMG27869_complete:A_BomoMG_comp108917_c0_seq1
225bp
 PREDICTED:_ras-related_protein_Rab-9A_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045335 C phagocytic vesicle
GO:0045921 P positive regulation of exocytosis
GO:0052405 P negative regulation by host of symbiont catalytic activity
GO:0070062 C extracellular exosome
10324 O_BomoMG2786_internal:A_BomoMG_comp22371_c0_seq1
343bp
 regulatory-associated_protein_of_TOR_[Bombyx_mori]
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0007050 P regulation of cell cycle
GO:0008361 P regulation of cell size
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0042325 P regulation of phosphorylation
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0071230 P cellular response to amino acid stimulus
GO:0071889 F 14-3-3 protein binding
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:1900034 P regulation of cellular response to heat
10325 O_BomoMG27870_5prime_partial:A_BomoMG_comp109028_c0_seq1
303bp
 surfeit_1_isoform_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004129 F cytochrome-c oxidase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006119 P oxidative phosphorylation
GO:0006754 P ATP biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
10326 O_BomoMG27872_complete:A_BomoMG_comp109098_c0_seq1
110bp
 ubiquitin-related_modifier_1_homolog_[Bombyx_mori]
GO:0002098 P tRNA wobble uridine modification
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0032447 P protein urmylation
GO:0034227 P tRNA thio-modification
10327 O_BomoMG27873_internal:A_BomoMG_comp109450_c0_seq1
720bp
 PREDICTED:_myb-like_protein_X_[Bombyx_mori]
10328 O_BomoMG27877_3prime_partial:A_BomoMG_comp109789_c0_seq1
478bp
 PREDICTED:_wee1-like_protein_kinase_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0000280 P nuclear division
GO:0000287 F magnesium ion binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0045448 P mitotic cell cycle, embryonic
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0046872 F metal ion binding
GO:0051225 P spindle assembly
GO:0051299 P centrosome separation
GO:0051301 P cell division
GO:0051642 P centrosome localization
10329 O_BomoMG27878_5prime_partial:A_BomoMG_comp109832_c0_seq1
492bp
 beta-1,3-glucan_recognition_protein_3_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
10330 O_BomoMG27879_3prime_partial:A_BomoMG_comp110338_c0_seq1
457bp
 PREDICTED:_tyrosine--tRNA_ligase,_mitochondrial_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004831 F tyrosine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006437 P tyrosyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
GO:0070184 P mitochondrial tyrosyl-tRNA aminoacylation
10331 O_BomoMG27880_3prime_partial:A_BomoMG_comp110387_c0_seq1
308bp
 PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC3_[Plutella_xylostella]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
10332 O_BomoMG27881_complete:A_BomoMG_comp110611_c0_seq1
225bp
 PREDICTED:_uncharacterized_protein_LOC106131149_[Amyelois_transitella]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006915 P apoptotic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007399 P nervous system development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0070050 P neuron cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
GO:1900074 P negative regulation of neuromuscular synaptic transmission
10333 O_BomoMG27882_complete:A_BomoMG_comp111326_c0_seq1
108bp
 allatostatin_CC_precursor_splicing_variant_b_[Chilo_suppressalis]
10334 O_BomoMG27883_complete:A_BomoMG_comp111574_c0_seq1
251bp
 Cyclin_[Operophtera_brumata]
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0005634 C nucleus
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0030295 F protein kinase activator activity
GO:0032147 P activation of protein kinase activity
GO:0043410 P positive regulation of MAPK cascade
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
10335 O_BomoMG27885_complete:A_BomoMG_comp111766_c0_seq1
341bp
 PREDICTED:_uncharacterized_protein_LOC105842396_[Bombyx_mori]
10336 O_BomoMG27886_complete:A_BomoMG_comp111778_c0_seq1
298bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_regulator_of_microtubule_dynamics_protein_1-like_[Amyelois_transitella]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
10337 O_BomoMG27888_internal:A_BomoMG_comp111922_c0_seq1
163bp
 PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045178 C basal part of cell
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
10338 O_BomoMG2788_internal:A_BomoMG_comp22374_c0_seq1
131bp
 PREDICTED:_huntingtin_[Bombyx_mori]
10339 O_BomoMG27890_complete:A_BomoMG_comp111927_c0_seq1
308bp
 PREDICTED:_tRNA_methyltransferase_10_homolog_A_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
10340 O_BomoMG27891_5prime_partial:A_BomoMG_comp112002_c0_seq1
494bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_24_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
10341 O_BomoMG27892_complete:A_BomoMG_comp112049_c0_seq1
461bp
 juvenile_hormone_epoxide_hydrolase-like_protein_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0033961 F cis-stilbene-oxide hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
10342 O_BomoMG27893_complete:A_BomoMG_comp112671_c0_seq1
165bp
 hypothetical_protein_KGM_15428_[Danaus_plexippus]
GO:0004252 F serine-type endopeptidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0006627 P protein processing involved in protein targeting to mitochondrion
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0033108 P mitochondrial respiratory chain complex assembly
GO:0042720 C mitochondrial inner membrane peptidase complex
10343 O_BomoMG27894_complete:A_BomoMG_comp112917_c0_seq1
128bp
 DNA-directed_RNA_polymerase_subunit_[Operophtera_brumata]
GO:0001193 P maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005730 C nucleolus
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
10344 O_BomoMG27895_complete:A_BomoMG_comp113204_c0_seq1
306bp
 PREDICTED:_39S_ribosomal_protein_L19,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
10345 O_BomoMG27898_internal:A_BomoMG_comp113261_c0_seq1
141bp
 PREDICTED:_microsomal_triglyceride_transfer_protein_large_subunit-like_[Bombyx_mori]
10346 O_BomoMG2789_internal:A_BomoMG_comp22374_c1_seq1
385bp
 PREDICTED:_huntingtin,_partial_[Papilio_xuthus]
10347 O_BomoMG278_3prime_partial:A_BomoMG_comp17591_c0_seq2
256bp
 p53_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000733 P obsolete DNA strand renaturation
GO:0000785 C chromatin
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005507 F copper ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007569 P cell aging
GO:0010165 P response to X-ray
GO:0010332 P response to gamma radiation
GO:0012501 P programmed cell death
GO:0030308 P negative regulation of cell growth
GO:0031065 P positive regulation of histone deacetylation
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0034644 P cellular response to UV
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0048512 P circadian behavior
GO:0051262 P protein tetramerization
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:0097252 P oligodendrocyte apoptotic process
10348 O_BomoMG27900_complete:A_BomoMG_comp113316_c0_seq1
478bp
 PREDICTED:_rab11_family-interacting_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0045055 P regulated exocytosis
GO:0055037 C recycling endosome
GO:0070164 P negative regulation of adiponectin secretion
10349 O_BomoMG27904_complete:A_BomoMG_comp113822_c0_seq1
406bp
 PREDICTED:_general_transcription_factor_IIH_subunit_2_[Papilio_polytes]
GO:0000439 C transcription factor TFIIH core complex
GO:0003674 F molecular_function
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
10350 O_BomoMG27905_5prime_partial:A_BomoMG_comp114544_c0_seq1
340bp
 PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
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