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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2851 O_BomoFB12567_complete:A_BomoFB_comp10238_c0_seq2
143bp
 mKIAA0929_protein_[Mus_musculus]
2852 O_BomoFB12568_complete:A_BomoFB_comp10238_c0_seq2
118bp
 threonine_synthase_[Anaeromyxobacter_sp._Fw109-5]
2853 O_BomoFB12569_complete:A_BomoFB_comp10238_c0_seq2
112bp
 PREDICTED:_long_chain_acyl-CoA_synthetase_1-like_[Brassica_rapa]
2854 O_BomoFB1256_5prime_partial:A_BomoFB_comp3038_c0_seq1
206bp
 PREDICTED:_pleiotropic_regulator_1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2855 O_BomoFB12570_5prime_partial:A_BomoFB_comp10238_c0_seq3
2626bp
 PREDICTED:_supervillin-like_isoform_X2_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
2856 O_BomoFB12571_complete:A_BomoFB_comp10238_c0_seq3
348bp
 LysR_family_transcriptional_regulator_[Bradyrhizobium_sp._Tv2a-2]
2857 O_BomoFB12572_5prime_partial:A_BomoFB_comp10238_c0_seq3
208bp
 FAD-dependent_thymidylate_synthase_[Syntrophorhabdus_aromaticivorans]
2858 O_BomoFB12573_complete:A_BomoFB_comp10238_c0_seq3
151bp
2859 O_BomoFB12574_complete:A_BomoFB_comp10238_c0_seq3
143bp
 mKIAA0929_protein_[Mus_musculus]
2860 O_BomoFB12575_complete:A_BomoFB_comp10238_c0_seq3
118bp
 threonine_synthase_[Anaeromyxobacter_sp._Fw109-5]
2861 O_BomoFB12576_complete:A_BomoFB_comp10238_c0_seq3
117bp
 Unc104-like_kinesin,_putative_[Trypanosoma_cruzi]
2862 O_BomoFB12577_complete:A_BomoFB_comp10238_c0_seq3
112bp
 PREDICTED:_long_chain_acyl-CoA_synthetase_1-like_[Brassica_rapa]
2863 O_BomoFB12578_internal:A_BomoFB_comp10239_c0_seq1
405bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
2864 O_BomoFB12579_5prime_partial:A_BomoFB_comp10239_c0_seq1
128bp
2865 O_BomoFB1257_3prime_partial:A_BomoFB_comp3038_c0_seq1
128bp
 polyketide_biosynthesis_methyltransferase_[Pseudomonas_resinovorans]
2866 O_BomoFB12580_complete:A_BomoFB_comp10242_c0_seq1
372bp
 PREDICTED:_methionine_aminopeptidase_1_isoform_X2_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070527 P platelet aggregation
2867 O_BomoFB12581_5prime_partial:A_BomoFB_comp10242_c0_seq2
391bp
 PREDICTED:_methionine_aminopeptidase_1_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2868 O_BomoFB12582_complete:A_BomoFB_comp10243_c0_seq1
852bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2869 O_BomoFB12583_complete:A_BomoFB_comp10243_c0_seq1
250bp
2870 O_BomoFB12584_complete:A_BomoFB_comp10243_c0_seq1
129bp
 hypothetical_protein_EUTSA_v10007008mg_[Eutrema_salsugineum]
2871 O_BomoFB12585_complete:A_BomoFB_comp10243_c0_seq2
770bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2872 O_BomoFB12586_complete:A_BomoFB_comp10243_c0_seq2
250bp
2873 O_BomoFB12587_complete:A_BomoFB_comp10243_c0_seq2
129bp
 hypothetical_protein_EUTSA_v10007008mg_[Eutrema_salsugineum]
2874 O_BomoFB12588_complete:A_BomoFB_comp10243_c0_seq3
770bp
 PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X4_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2875 O_BomoFB12589_complete:A_BomoFB_comp10243_c0_seq3
250bp
2876 O_BomoFB1258_complete:A_BomoFB_comp3040_c0_seq2
292bp
 PREDICTED:_syntaxin-1A_isoform_X5_[Papilio_xuthus]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
2877 O_BomoFB12590_complete:A_BomoFB_comp10243_c0_seq3
129bp
 hypothetical_protein_EUTSA_v10007008mg_[Eutrema_salsugineum]
2878 O_BomoFB12591_complete:A_BomoFB_comp10246_c0_seq1
589bp
 PREDICTED:_ABC_transporter_F_family_member_4-like_[Bombyx_mori]
2879 O_BomoFB12592_complete:A_BomoFB_comp10246_c0_seq1
130bp
 PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_9-like_isoform_X1_[Crassostrea_gigas]
2880 O_BomoFB12593_complete:A_BomoFB_comp10246_c0_seq1
108bp
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