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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2821 O_BomoFB1253_complete:A_BomoFB_comp3028_c0_seq1
254bp
 PREDICTED:_nuclear_factor_erythroid_2-related_factor_2-like_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
2822 O_BomoFB12540_complete:A_BomoFB_comp10231_c0_seq1
348bp
 PREDICTED:_50S_ribosomal_protein_L1_[Papilio_xuthus]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
2823 O_BomoFB12541_complete:A_BomoFB_comp10231_c0_seq1
121bp
 uncharacterized_protein_[Arabidopsis_thaliana]
2824 O_BomoFB12542_complete:A_BomoFB_comp10232_c0_seq1
281bp
 PREDICTED:_probable_palmitoyltransferase_ZDHHC24_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
2825 O_BomoFB12543_complete:A_BomoFB_comp10232_c0_seq1
132bp
 Major_facilitator_superfamily_domain-containing_protein_1_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2826 O_BomoFB12544_complete:A_BomoFB_comp10232_c0_seq2
516bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_1-like_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2827 O_BomoFB12545_complete:A_BomoFB_comp10232_c0_seq2
281bp
 PREDICTED:_probable_palmitoyltransferase_ZDHHC24_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
2828 O_BomoFB12546_5prime_partial:A_BomoFB_comp10233_c0_seq1
291bp
 PREDICTED:_serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_epsilon_isoform_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0005634 C nucleus
GO:0007165 P signal transduction
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
2829 O_BomoFB12547_complete:A_BomoFB_comp10233_c0_seq2
150bp
 PREDICTED:_serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_epsilon_isoform_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0005634 C nucleus
GO:0007165 P signal transduction
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
2830 O_BomoFB12548_complete:A_BomoFB_comp10233_c0_seq3
463bp
 Serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_alpha_isoform_[Papilio_xuthus]
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0008601 F protein phosphatase regulator activity
GO:0016020 C membrane
GO:0019900 F kinase binding
GO:0030018 C Z disc
GO:0031430 C M band
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0035307 P positive regulation of protein dephosphorylation
GO:0090005 P negative regulation of protein localization to plasma membrane
GO:0090219 P negative regulation of lipid kinase activity
GO:1904886 P beta-catenin destruction complex disassembly
2831 O_BomoFB12549_3prime_partial:A_BomoFB_comp10233_c0_seq3
249bp
 PREDICTED:_jmjC_domain-containing_histone_demethylation_protein_1_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0019005 C SCF ubiquitin ligase complex
GO:0019233 P sensory perception of pain
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031519 C PcG protein complex
GO:0033522 P histone H2A ubiquitination
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
2832 O_BomoFB1254_internal:A_BomoFB_comp3035_c0_seq1
559bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0070604 C RSC-type complex
2833 O_BomoFB12550_complete:A_BomoFB_comp10233_c0_seq4
463bp
 Serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_alpha_isoform_[Papilio_xuthus]
GO:0000159 C protein phosphatase type 2A complex
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0008601 F protein phosphatase regulator activity
GO:0016020 C membrane
GO:0019900 F kinase binding
GO:0030018 C Z disc
GO:0031430 C M band
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0035307 P positive regulation of protein dephosphorylation
GO:0090005 P negative regulation of protein localization to plasma membrane
GO:0090219 P negative regulation of lipid kinase activity
GO:1904886 P beta-catenin destruction complex disassembly
2834 O_BomoFB12551_3prime_partial:A_BomoFB_comp10233_c0_seq4
249bp
 PREDICTED:_jmjC_domain-containing_histone_demethylation_protein_1_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0019005 C SCF ubiquitin ligase complex
GO:0019233 P sensory perception of pain
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031519 C PcG protein complex
GO:0033522 P histone H2A ubiquitination
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
2835 O_BomoFB12552_internal:A_BomoFB_comp10234_c0_seq1
574bp
 PREDICTED:_mucin-2-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2836 O_BomoFB12553_complete:A_BomoFB_comp10234_c0_seq1
100bp
 alpha_subunit_of_RNA_polymerase_[Leptosira_terrestris]
2837 O_BomoFB12554_complete:A_BomoFB_comp10235_c0_seq1
297bp
 4-nitrophenylphosphatase_[Bombyx_mori]
GO:0004674 F protein serine/threonine kinase activity
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0009507 C chloroplast
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
2838 O_BomoFB12555_5prime_partial:A_BomoFB_comp10237_c1_seq1
108bp
 hypothetical_protein_[Flavobacterium_columnare]
2839 O_BomoFB12556_5prime_partial:A_BomoFB_comp10237_c2_seq2
100bp
 aldehyde_dehydrogenase_[Geodermatophilaceae_bacterium_URHB0048]
2840 O_BomoFB12557_complete:A_BomoFB_comp10237_c3_seq2
434bp
 PREDICTED:_iron/zinc_purple_acid_phosphatase-like_protein_isoform_X6_[Plutella_xylostella]
GO:0003993 F acid phosphatase activity
GO:0005576 C extracellular region
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2841 O_BomoFB12558_5prime_partial:A_BomoFB_comp10238_c0_seq1
1065bp
 PREDICTED:_supervillin-like_isoform_X3_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
2842 O_BomoFB12559_complete:A_BomoFB_comp10238_c0_seq1
348bp
 LysR_family_transcriptional_regulator_[Bradyrhizobium_sp._Tv2a-2]
2843 O_BomoFB1255_internal:A_BomoFB_comp3038_c0_seq1
218bp
 3-hydroxyacyl-CoA_dehydrogenase_[Chelatococcus_sp._CO-6]
2844 O_BomoFB12560_5prime_partial:A_BomoFB_comp10238_c0_seq1
208bp
 FAD-dependent_thymidylate_synthase_[Syntrophorhabdus_aromaticivorans]
2845 O_BomoFB12561_complete:A_BomoFB_comp10238_c0_seq1
151bp
2846 O_BomoFB12562_complete:A_BomoFB_comp10238_c0_seq1
118bp
 threonine_synthase_[Anaeromyxobacter_sp._Fw109-5]
2847 O_BomoFB12563_5prime_partial:A_BomoFB_comp10238_c0_seq2
2514bp
 PREDICTED:_uncharacterized_protein_LOC101741882_isoform_X4_[Bombyx_mori]
GO:0002102 C podosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007010 P cytoskeleton organization
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032467 P positive regulation of cytokinesis
GO:0036449 C microtubule minus-end
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0071437 C obsolete invadopodium
2848 O_BomoFB12564_complete:A_BomoFB_comp10238_c0_seq2
348bp
 LysR_family_transcriptional_regulator_[Bradyrhizobium_sp._Tv2a-2]
2849 O_BomoFB12565_5prime_partial:A_BomoFB_comp10238_c0_seq2
208bp
 FAD-dependent_thymidylate_synthase_[Syntrophorhabdus_aromaticivorans]
2850 O_BomoFB12566_complete:A_BomoFB_comp10238_c0_seq2
151bp
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