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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2551 O_BomoFB12297_5prime_partial:A_BomoFB_comp10189_c0_seq14
181bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
2552 O_BomoFB12298_complete:A_BomoFB_comp10189_c0_seq15
743bp
 PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
2553 O_BomoFB12299_complete:A_BomoFB_comp10189_c0_seq15
103bp
 glutamate_ligase_[Pseudomonas_taetrolens]
2554 O_BomoFB1229_complete:A_BomoFB_comp3003_c0_seq1
205bp
2555 O_BomoFB122_5prime_partial:A_BomoFB_comp319_c1_seq1
136bp
 PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
2556 O_BomoFB12300_3prime_partial:A_BomoFB_comp10189_c0_seq16
636bp
 PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
2557 O_BomoFB12301_complete:A_BomoFB_comp10189_c0_seq16
103bp
 glutamate_ligase_[Pseudomonas_taetrolens]
2558 O_BomoFB12302_complete:A_BomoFB_comp10189_c0_seq17
774bp
 PREDICTED:_calpain-A-like_isoform_X2_[Papilio_polytes]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
2559 O_BomoFB12303_complete:A_BomoFB_comp10189_c0_seq17
106bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_polycystin-1_[Loxodonta_africana]
2560 O_BomoFB12304_complete:A_BomoFB_comp10189_c0_seq17
103bp
 glutamate_ligase_[Pseudomonas_taetrolens]
2561 O_BomoFB12305_complete:A_BomoFB_comp10189_c0_seq18
743bp
 PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
2562 O_BomoFB12306_complete:A_BomoFB_comp10189_c0_seq18
103bp
 glutamate_ligase_[Pseudomonas_taetrolens]
2563 O_BomoFB12307_complete:A_BomoFB_comp10189_c0_seq19
743bp
 PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
2564 O_BomoFB12308_complete:A_BomoFB_comp10189_c0_seq19
103bp
 glutamate_ligase_[Pseudomonas_taetrolens]
2565 O_BomoFB12309_3prime_partial:A_BomoFB_comp10191_c0_seq1
692bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2-alpha_kinase-like_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0002183 P cytoplasmic translational initiation
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0010942 P positive regulation of cell death
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022626 C cytosolic ribosome
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0034198 P cellular response to amino acid starvation
GO:0070301 P cellular response to hydrogen peroxide
GO:0071263 P negative regulation of translational initiation in response to starvation
GO:0071849 P obsolete G1 cell cycle arrest in response to nitrogen starvation
GO:0072755 P cellular response to benomyl
GO:1904803 P regulation of translation involved in cellular response to UV
GO:1990451 P cellular stress response to acidic pH
GO:1990497 P regulation of cytoplasmic translation in response to stress
2566 O_BomoFB1230_5prime_partial:A_BomoFB_comp3003_c0_seq1
199bp
 hypothetical_protein_HR12_07155_[Microbacterium_sp._SUBG005]
2567 O_BomoFB12310_complete:A_BomoFB_comp10191_c0_seq1
108bp
 Rho_guanine_nucleotide_exchange_factor_40_[Fukomys_damarensis]
2568 O_BomoFB12311_complete:A_BomoFB_comp10191_c0_seq1
106bp
 hypothetical_protein_PV08_03644_[Exophiala_spinifera]
2569 O_BomoFB12312_5prime_partial:A_BomoFB_comp10191_c0_seq1
100bp
 unknown_[Zea_mays]
2570 O_BomoFB12313_3prime_partial:A_BomoFB_comp10191_c0_seq2
681bp
 PREDICTED:_eukaryotic_translation_initiation_factor_2-alpha_kinase-like_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0002183 P cytoplasmic translational initiation
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006468 P protein phosphorylation
GO:0010942 P positive regulation of cell death
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022626 C cytosolic ribosome
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0034198 P cellular response to amino acid starvation
GO:0070301 P cellular response to hydrogen peroxide
GO:0071263 P negative regulation of translational initiation in response to starvation
GO:0071849 P obsolete G1 cell cycle arrest in response to nitrogen starvation
GO:0072755 P cellular response to benomyl
GO:1904803 P regulation of translation involved in cellular response to UV
GO:1990451 P cellular stress response to acidic pH
GO:1990497 P regulation of cytoplasmic translation in response to stress
2571 O_BomoFB12314_complete:A_BomoFB_comp10191_c0_seq2
164bp
 hypothetical_protein_PHYSODRAFT_336109_[Phytophthora_sojae]
2572 O_BomoFB12315_complete:A_BomoFB_comp10191_c0_seq2
113bp
 glutathione-dependent_formaldehyde_dehydrogenase_[Hymenobacter_sp._MIMtkLc17]
2573 O_BomoFB12316_5prime_partial:A_BomoFB_comp10191_c0_seq2
100bp
 unknown_[Zea_mays]
2574 O_BomoFB12317_complete:A_BomoFB_comp10192_c0_seq1
313bp
 C-type_lectin_21_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
2575 O_BomoFB12318_complete:A_BomoFB_comp10192_c0_seq2
313bp
 C-type_lectin_19_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0030246 F carbohydrate binding
2576 O_BomoFB12319_complete:A_BomoFB_comp10193_c0_seq1
802bp
 PREDICTED:_U3_small_nucleolar_RNA-associated_protein_14_homolog_A_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030490 P maturation of SSU-rRNA
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
2577 O_BomoFB1231_3prime_partial:A_BomoFB_comp3004_c0_seq1
342bp
 PREDICTED:_endonuclease_III-like_protein_1_isoform_X3_[Bombyx_mori]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
2578 O_BomoFB12320_complete:A_BomoFB_comp10193_c0_seq1
246bp
2579 O_BomoFB12321_5prime_partial:A_BomoFB_comp10193_c0_seq1
134bp
 PREDICTED:_N-acylneuraminate_cytidylyltransferase_[Amyelois_transitella]
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0006054 P N-acetylneuraminate metabolic process
GO:0008781 F N-acylneuraminate cytidylyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0090632 F N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity
GO:0090633 F keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity
2580 O_BomoFB12322_complete:A_BomoFB_comp10193_c0_seq1
118bp
 PREDICTED:_bcl-2-related_protein_A1_[Sarcophilus_harrisii]
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