Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2521	O_BomoFB1226_3prime_partial:A_BomoFB_comp3001_c1_seq1 324bp	Bomo_Chr21	PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005704 C polytene chromosome band GO:0005737 C cytoplasm GO:0005813 C centrosome GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0005875 C microtubule associated complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007017 P microtubule-based process GO:0008017 F microtubule binding GO:0010468 P regulation of gene expression GO:0016568 P chromatin organization GO:0031208 F POZ domain binding GO:0031937 P obsolete positive regulation of chromatin silencing GO:0035191 P nuclear axial expansion GO:0043035 F chromatin insulator sequence binding GO:0046872 F metal ion binding GO:0051493 P regulation of cytoskeleton organization GO:0090202 P obsolete gene looping
2522	O_BomoFB12270_complete:A_BomoFB_comp10189_c0_seq1 743bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2523	O_BomoFB12271_complete:A_BomoFB_comp10189_c0_seq1 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2524	O_BomoFB12272_complete:A_BomoFB_comp10189_c0_seq2 753bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2525	O_BomoFB12273_complete:A_BomoFB_comp10189_c0_seq2 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2526	O_BomoFB12274_complete:A_BomoFB_comp10189_c0_seq3 743bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2527	O_BomoFB12275_complete:A_BomoFB_comp10189_c0_seq3 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2528	O_BomoFB12276_5prime_partial:A_BomoFB_comp10189_c0_seq4 191bp	Bomo_Chr24	PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006909 P phagocytosis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008340 P determination of adult lifespan GO:0009953 P dorsal/ventral pattern formation GO:0015629 C actin cytoskeleton GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0030036 P actin cytoskeleton organization GO:0042335 P cuticle development GO:0043025 C neuronal cell body GO:0046872 F metal ion binding GO:0050832 P defense response to fungus
2529	O_BomoFB12277_complete:A_BomoFB_comp10189_c0_seq5 753bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2530	O_BomoFB12278_complete:A_BomoFB_comp10189_c0_seq5 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2531	O_BomoFB12279_complete:A_BomoFB_comp10189_c0_seq6 774bp	Bomo_Chr24	PREDICTED:_calpain-A-like_isoform_X2_[Papilio_polytes]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2532	O_BomoFB1227_internal:A_BomoFB_comp3002_c0_seq1 351bp	Bomo_Chr8	PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_4_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004725 F protein tyrosine phosphatase activity GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005886 C plasma membrane GO:0006470 P protein dephosphorylation GO:0008092 F cytoskeletal protein binding GO:0009898 C cytoplasmic side of plasma membrane GO:0016020 C membrane GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0035335 P peptidyl-tyrosine dephosphorylation
2533	O_BomoFB12280_complete:A_BomoFB_comp10189_c0_seq6 106bp	Bomo_Chr24	PREDICTED:_LOW_QUALITY_PROTEIN:_polycystin-1_[Loxodonta_africana]
2534	O_BomoFB12281_complete:A_BomoFB_comp10189_c0_seq6 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2535	O_BomoFB12282_complete:A_BomoFB_comp10189_c0_seq7 743bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2536	O_BomoFB12283_complete:A_BomoFB_comp10189_c0_seq7 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2537	O_BomoFB12284_3prime_partial:A_BomoFB_comp10189_c0_seq8 636bp	Bomo_Chr24	PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006909 P phagocytosis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008340 P determination of adult lifespan GO:0009953 P dorsal/ventral pattern formation GO:0015629 C actin cytoskeleton GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0030036 P actin cytoskeleton organization GO:0042335 P cuticle development GO:0043025 C neuronal cell body GO:0046872 F metal ion binding GO:0050832 P defense response to fungus
2538	O_BomoFB12285_complete:A_BomoFB_comp10189_c0_seq8 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2539	O_BomoFB12286_3prime_partial:A_BomoFB_comp10189_c0_seq9 636bp	Bomo_Chr24	PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006909 P phagocytosis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008340 P determination of adult lifespan GO:0009953 P dorsal/ventral pattern formation GO:0015629 C actin cytoskeleton GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0030036 P actin cytoskeleton organization GO:0042335 P cuticle development GO:0043025 C neuronal cell body GO:0046872 F metal ion binding GO:0050832 P defense response to fungus
2540	O_BomoFB12287_complete:A_BomoFB_comp10189_c0_seq9 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2541	O_BomoFB12288_complete:A_BomoFB_comp10189_c0_seq10 784bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X1_[Papilio_polytes]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2542	O_BomoFB12289_complete:A_BomoFB_comp10189_c0_seq10 106bp	Bomo_Chr24	PREDICTED:_LOW_QUALITY_PROTEIN:_polycystin-1_[Loxodonta_africana]
2543	O_BomoFB1228_internal:A_BomoFB_comp3003_c0_seq1 854bp	Bomo_Chr16	PREDICTED:_phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004430 F 1-phosphatidylinositol 4-kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016773 F phosphotransferase activity, alcohol group as acceptor GO:0030660 C Golgi-associated vesicle membrane GO:0046854 P phosphatidylinositol phosphate biosynthetic process GO:0048015 P phosphatidylinositol-mediated signaling
2544	O_BomoFB12290_complete:A_BomoFB_comp10189_c0_seq10 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2545	O_BomoFB12291_3prime_partial:A_BomoFB_comp10189_c0_seq11 667bp	Bomo_Chr24	PREDICTED:_calpain-A_isoform_X1_[Bombyx_mori]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006909 P phagocytosis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008340 P determination of adult lifespan GO:0009953 P dorsal/ventral pattern formation GO:0015629 C actin cytoskeleton GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0030036 P actin cytoskeleton organization GO:0042335 P cuticle development GO:0043025 C neuronal cell body GO:0046872 F metal ion binding GO:0050832 P defense response to fungus
2546	O_BomoFB12292_complete:A_BomoFB_comp10189_c0_seq11 106bp	Bomo_Chr24	PREDICTED:_LOW_QUALITY_PROTEIN:_polycystin-1_[Loxodonta_africana]
2547	O_BomoFB12293_complete:A_BomoFB_comp10189_c0_seq11 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]
2548	O_BomoFB12294_5prime_partial:A_BomoFB_comp10189_c0_seq12 181bp	Bomo_Chr24	PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0006909 P phagocytosis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008340 P determination of adult lifespan GO:0009953 P dorsal/ventral pattern formation GO:0015629 C actin cytoskeleton GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning GO:0030036 P actin cytoskeleton organization GO:0042335 P cuticle development GO:0043025 C neuronal cell body GO:0046872 F metal ion binding GO:0050832 P defense response to fungus
2549	O_BomoFB12295_complete:A_BomoFB_comp10189_c0_seq13 753bp	Bomo_Chr24	PREDICTED:_calpain-B-like_isoform_X6_[Papilio_xuthus]	GO:0004198 F calcium-dependent cysteine-type endopeptidase activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0007298 P border follicle cell migration GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016020 C membrane GO:0016540 P protein autoprocessing GO:0016787 F hydrolase activity GO:0019233 P sensory perception of pain GO:0046872 F metal ion binding
2550	O_BomoFB12296_complete:A_BomoFB_comp10189_c0_seq13 103bp	Bomo_Chr24	glutamate_ligase_[Pseudomonas_taetrolens]