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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2491 O_BomoFB12242_3prime_partial:A_BomoFB_comp10185_c0_seq2
311bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2492 O_BomoFB12243_3prime_partial:A_BomoFB_comp10185_c0_seq3
449bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2493 O_BomoFB12244_internal:A_BomoFB_comp10185_c0_seq4
457bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2494 O_BomoFB12245_5prime_partial:A_BomoFB_comp10185_c0_seq5
381bp
 PREDICTED:_UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
2495 O_BomoFB12246_3prime_partial:A_BomoFB_comp10185_c0_seq5
311bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2496 O_BomoFB12247_5prime_partial:A_BomoFB_comp10185_c0_seq6
493bp
 UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
2497 O_BomoFB12248_3prime_partial:A_BomoFB_comp10185_c0_seq6
311bp
 UDP-glucosyltransferase_precursor_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2498 O_BomoFB12249_3prime_partial:A_BomoFB_comp10185_c0_seq7
306bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
2499 O_BomoFB1224_5prime_partial:A_BomoFB_comp3000_c0_seq2
109bp
 preprotein_translocase_subunit_SecD_[Pseudomonas_alkylphenolia]
2500 O_BomoFB12250_complete:A_BomoFB_comp10185_c0_seq7
112bp
 UDP-glycosyltransferase_UGT40K1_[Bombyx_mori]
2501 O_BomoFB12251_complete:A_BomoFB_comp10186_c0_seq2
240bp
 PREDICTED:_uncharacterized_protein_LOC101741377_isoform_X4_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003726 F double-stranded RNA adenosine deaminase activity
GO:0004000 F adenosine deaminase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006382 P adenosine to inosine editing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0016787 F hydrolase activity
GO:0030336 P negative regulation of cell migration
GO:0044387 P negative regulation of protein kinase activity by regulation of protein phosphorylation
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
2502 O_BomoFB12252_complete:A_BomoFB_comp10186_c0_seq2
196bp
 RND_transporter_[Leeuwenhoekiella_blandensis]
2503 O_BomoFB12253_complete:A_BomoFB_comp10186_c0_seq3
342bp
 PREDICTED:_uncharacterized_protein_LOC101741377_isoform_X1_[Bombyx_mori]
2504 O_BomoFB12254_complete:A_BomoFB_comp10186_c0_seq3
223bp
 MULTISPECIES:_ABC_transporter_permease_[Mesorhizobium]
2505 O_BomoFB12255_3prime_partial:A_BomoFB_comp10187_c0_seq1
448bp
 PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
2506 O_BomoFB12256_3prime_partial:A_BomoFB_comp10187_c0_seq2
510bp
 PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
2507 O_BomoFB12257_complete:A_BomoFB_comp10187_c0_seq2
104bp
 hypothetical_protein_[Streptomyces_sp._AcH_505]
2508 O_BomoFB12258_3prime_partial:A_BomoFB_comp10187_c0_seq3
559bp
 lipophorin_receptor_isoform_1_precursor_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
2509 O_BomoFB12259_complete:A_BomoFB_comp10187_c0_seq3
179bp
 hypothetical_protein_AMJ60_06100_[Desulfobacterales_bacterium_SG8_35]
2510 O_BomoFB1225_internal:A_BomoFB_comp3001_c0_seq1
309bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0035191 P nuclear axial expansion
GO:0043035 F chromatin insulator sequence binding
GO:0046872 F metal ion binding
GO:0051493 P regulation of cytoskeleton organization
GO:0090202 P obsolete gene looping
2511 O_BomoFB12260_3prime_partial:A_BomoFB_comp10187_c0_seq4
509bp
 lipophorin_receptor_isoform_1_precursor_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
2512 O_BomoFB12261_complete:A_BomoFB_comp10187_c0_seq4
134bp
2513 O_BomoFB12262_complete:A_BomoFB_comp10187_c0_seq4
103bp
 aspartate--tRNA_ligase_[Alistipes_inops]
2514 O_BomoFB12263_3prime_partial:A_BomoFB_comp10187_c0_seq5
560bp
 PREDICTED:_lipophorin_receptor_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
2515 O_BomoFB12264_complete:A_BomoFB_comp10187_c0_seq5
180bp
 hypothetical_protein_S40288_08651_[Stachybotrys_chartarum_IBT_40288]
2516 O_BomoFB12265_5prime_partial:A_BomoFB_comp10187_c0_seq6
346bp
 lipophorin_receptor_isoform_3_precursor_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001666 P response to hypoxia
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048813 P dendrite morphogenesis
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
GO:1900006 P positive regulation of dendrite development
2517 O_BomoFB12266_3prime_partial:A_BomoFB_comp10187_c0_seq7
372bp
 PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001948 F protein binding
GO:0002020 F protease binding
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0010899 P regulation of phosphatidylcholine catabolic process
GO:0012505 C endomembrane system
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0030169 F low-density lipoprotein particle binding
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030299 P intestinal cholesterol absorption
GO:0030301 P cholesterol transport
GO:0034362 C low-density lipoprotein particle
GO:0034383 P low-density lipoprotein particle clearance
GO:0042157 P lipoprotein metabolic process
GO:0042159 P lipoprotein catabolic process
GO:0042632 P cholesterol homeostasis
GO:0042802 F identical protein binding
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0050729 P positive regulation of inflammatory response
GO:0070508 P cholesterol import
GO:0071398 P cellular response to fatty acid
GO:1990666 C PCSK9-LDLR complex
GO:2000188 P cholesterol homeostasis
2518 O_BomoFB12267_5prime_partial:A_BomoFB_comp10187_c0_seq8
373bp
 PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001666 P response to hypoxia
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048813 P dendrite morphogenesis
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
GO:1900006 P positive regulation of dendrite development
2519 O_BomoFB12268_complete:A_BomoFB_comp10188_c0_seq1
354bp
 G_protein_alpha_q_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
2520 O_BomoFB12269_complete:A_BomoFB_comp10188_c0_seq1
136bp
 alkyldihydroxyacetonephosphate_synthase_[Chondromyces_crocatus]
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