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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2461 O_BomoFB12215_complete:A_BomoFB_comp10180_c1_seq6
111bp
 hydroxyacid_dehydrogenase_[Mycobacterium_gilvum]
2462 O_BomoFB12216_5prime_partial:A_BomoFB_comp10181_c0_seq1
230bp
 c-Cbl-associated_protein_isoform_A_[Danaus_plexippus]
2463 O_BomoFB12217_5prime_partial:A_BomoFB_comp10181_c1_seq1
1072bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
2464 O_BomoFB12218_complete:A_BomoFB_comp10181_c1_seq1
119bp
 PREDICTED:_arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_3_[Chlamydotis_macqueenii]
2465 O_BomoFB12219_complete:A_BomoFB_comp10181_c1_seq1
117bp
 hypothetical_protein_TGME49_016560_[Toxoplasma_gondii_ME49]
2466 O_BomoFB1221_3prime_partial:A_BomoFB_comp3000_c0_seq1
381bp
 PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
2467 O_BomoFB12220_complete:A_BomoFB_comp10181_c1_seq1
102bp
 Platelet-activating_factor_acetylhydrolase_IB_subunit_alpha/Nuclear_distribution_protein_PAC1_[Blumeria_graminis_f._sp._hordei_DH14]
2468 O_BomoFB12221_5prime_partial:A_BomoFB_comp10181_c1_seq2
1083bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
2469 O_BomoFB12222_complete:A_BomoFB_comp10181_c1_seq2
119bp
 PREDICTED:_arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_3_[Chlamydotis_macqueenii]
2470 O_BomoFB12223_complete:A_BomoFB_comp10181_c1_seq2
117bp
 hypothetical_protein_TGME49_016560_[Toxoplasma_gondii_ME49]
2471 O_BomoFB12224_complete:A_BomoFB_comp10181_c1_seq2
102bp
 Platelet-activating_factor_acetylhydrolase_IB_subunit_alpha/Nuclear_distribution_protein_PAC1_[Blumeria_graminis_f._sp._hordei_DH14]
2472 O_BomoFB12225_5prime_partial:A_BomoFB_comp10181_c1_seq3
1052bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
2473 O_BomoFB12226_complete:A_BomoFB_comp10181_c1_seq3
119bp
 PREDICTED:_arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_3_[Chlamydotis_macqueenii]
2474 O_BomoFB12227_complete:A_BomoFB_comp10181_c1_seq3
117bp
 hypothetical_protein_TGME49_016560_[Toxoplasma_gondii_ME49]
2475 O_BomoFB12228_complete:A_BomoFB_comp10181_c1_seq3
102bp
 Platelet-activating_factor_acetylhydrolase_IB_subunit_alpha/Nuclear_distribution_protein_PAC1_[Blumeria_graminis_f._sp._hordei_DH14]
2476 O_BomoFB12229_5prime_partial:A_BomoFB_comp10181_c1_seq4
1063bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
2477 O_BomoFB1222_5prime_partial:A_BomoFB_comp3000_c0_seq1
109bp
 preprotein_translocase_subunit_SecD_[Pseudomonas_alkylphenolia]
2478 O_BomoFB12230_complete:A_BomoFB_comp10181_c1_seq4
119bp
 PREDICTED:_arf-GAP_with_SH3_domain,_ANK_repeat_and_PH_domain-containing_protein_3_[Chlamydotis_macqueenii]
2479 O_BomoFB12231_complete:A_BomoFB_comp10181_c1_seq4
117bp
 hypothetical_protein_TGME49_016560_[Toxoplasma_gondii_ME49]
2480 O_BomoFB12232_complete:A_BomoFB_comp10181_c1_seq4
102bp
 Platelet-activating_factor_acetylhydrolase_IB_subunit_alpha/Nuclear_distribution_protein_PAC1_[Blumeria_graminis_f._sp._hordei_DH14]
2481 O_BomoFB12233_3prime_partial:A_BomoFB_comp10183_c0_seq1
484bp
 PREDICTED:_cytoplasmic_dynein_1_intermediate_chain_isoform_X4_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007291 P sperm individualization
GO:0007349 P cellularization
GO:0008088 P axo-dendritic transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016482 P cytosolic transport
GO:0030286 C dynein complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0043005 C neuron projection
GO:0045503 F dynein light chain binding
GO:0045504 F dynein heavy chain binding
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
2482 O_BomoFB12234_5prime_partial:A_BomoFB_comp10183_c0_seq1
218bp
 hypothetical_protein_[Sporichthya_polymorpha]
2483 O_BomoFB12235_3prime_partial:A_BomoFB_comp10183_c0_seq2
495bp
 PREDICTED:_cytoplasmic_dynein_1_intermediate_chain_isoform_X1_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007291 P sperm individualization
GO:0007349 P cellularization
GO:0008088 P axo-dendritic transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016482 P cytosolic transport
GO:0030286 C dynein complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0043005 C neuron projection
GO:0045503 F dynein light chain binding
GO:0045504 F dynein heavy chain binding
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
2484 O_BomoFB12236_5prime_partial:A_BomoFB_comp10183_c0_seq2
218bp
 hypothetical_protein_[Sporichthya_polymorpha]
2485 O_BomoFB12237_complete:A_BomoFB_comp10184_c0_seq3
194bp
 PREDICTED:_ras-related_C3_botulinum_toxin_substrate_1_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001891 C phagocytic cup
GO:0001934 P positive regulation of protein phosphorylation
GO:0002093 P auditory receptor cell morphogenesis
GO:0002551 P mast cell chemotaxis
GO:0003382 P epithelial cell morphogenesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006935 P chemotaxis
GO:0006972 P hyperosmotic response
GO:0007010 P cytoskeleton organization
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007411 P axon guidance
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0008361 P regulation of cell size
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010762 P regulation of fibroblast migration
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0014041 P regulation of neuron maturation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016358 P dendrite development
GO:0016477 P cell migration
GO:0016601 P Rac protein signal transduction
GO:0017137 F small GTPase binding
GO:0019897 C extrinsic component of plasma membrane
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021799 P cerebral cortex radially oriented cell migration
GO:0021831 P embryonic olfactory bulb interneuron precursor migration
GO:0021894 P cerebral cortex GABAergic interneuron development
GO:0022604 P regulation of cell morphogenesis
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030036 P actin cytoskeleton organization
GO:0030041 P actin filament polymerization
GO:0030334 P regulation of cell migration
GO:0030742 F GTP-dependent protein binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031410 C cytoplasmic vesicle
GO:0031529 P ruffle organization
GO:0031901 C early endosome membrane
GO:0031996 F thioesterase binding
GO:0032587 C ruffle membrane
GO:0032707 P negative regulation of interleukin-23 production
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035567 P non-canonical Wnt signaling pathway
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0042470 C melanosome
GO:0042826 F histone deacetylase binding
GO:0042995 C cell projection
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0043652 P engulfment of apoptotic cell
GO:0045216 P cell-cell junction organization
GO:0045453 P bone resorption
GO:0045740 P positive regulation of DNA replication
GO:0048532 P anatomical structure arrangement
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048870 P cell motility
GO:0048873 P homeostasis of number of cells within a tissue
GO:0051022 F Rho GDP-dissociation inhibitor binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051668 P localization within membrane
GO:0051894 P positive regulation of focal adhesion assembly
GO:0051932 P synaptic transmission, GABAergic
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0060263 P regulation of respiratory burst
GO:0070062 C extracellular exosome
GO:0071260 P cellular response to mechanical stimulus
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071542 P dopaminergic neuron differentiation
GO:0072659 P protein localization to plasma membrane
GO:0090023 P positive regulation of neutrophil chemotaxis
GO:0090103 P cochlea morphogenesis
GO:0097178 P ruffle assembly
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
2486 O_BomoFB12238_complete:A_BomoFB_comp10184_c0_seq3
110bp
 MULTISPECIES:_flagellar_basal_body_rod_protein_FlgF_[Thalassospira]
2487 O_BomoFB12239_3prime_partial:A_BomoFB_comp10185_c0_seq1
306bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
2488 O_BomoFB1223_3prime_partial:A_BomoFB_comp3000_c0_seq2
362bp
 PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
2489 O_BomoFB12240_5prime_partial:A_BomoFB_comp10185_c0_seq1
120bp
 PREDICTED:_UDP-glucosyltransferase_isoform_X1_[Bombyx_mori]
2490 O_BomoFB12241_complete:A_BomoFB_comp10185_c0_seq2
518bp
 PREDICTED:_UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
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