Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2431	O_BomoFB12189_complete:A_BomoFB_comp10171_c0_seq2 140bp	Bomo_Chr6	cytochrome_D1_[Pseudomonas_sp._250J]
2432	O_BomoFB1218_complete:A_BomoFB_comp2994_c0_seq1 128bp	Bomo_Chr25	PREDICTED:_protein_C-ets-2-like_isoform_X2_[Elephantulus_edwardii]
2433	O_BomoFB12190_5prime_partial:A_BomoFB_comp10173_c0_seq1 328bp	Bomo_Chr3	PREDICTED:_glyoxylate_reductase/hydroxypyruvate_reductase-like_[Plutella_xylostella]	GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0007588 P excretion GO:0008152 P metabolic process GO:0008465 F glycerate dehydrogenase activity GO:0016491 F oxidoreductase activity GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0016618 F hydroxypyruvate reductase activity GO:0030267 F glyoxylate reductase (NADP+) activity GO:0031406 F carboxylic acid binding GO:0042803 F protein homodimerization activity GO:0043648 P dicarboxylic acid metabolic process GO:0050661 F NADP binding GO:0051259 P protein complex oligomerization GO:0051287 F NAD binding GO:0055114 P obsolete oxidation-reduction process GO:0070062 C extracellular exosome GO:0070402 F NADPH binding
2434	O_BomoFB12191_internal:A_BomoFB_comp10174_c0_seq1 295bp	Bomo_Chr6	PREDICTED:_splicing_factor_1_isoform_X1_[Papilio_machaon]	GO:0000245 P spliceosomal complex assembly GO:0000389 P mRNA 3'-splice site recognition GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003714 F transcription corepressor activity GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005840 C ribosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008270 F zinc ion binding GO:0008380 P RNA splicing GO:0030238 P male sex determination GO:0033327 P Leydig cell differentiation GO:0042802 F identical protein binding GO:0044822 F RNA binding GO:0046872 F metal ion binding GO:0048662 P negative regulation of smooth muscle cell proliferation GO:0050810 P regulation of steroid biosynthetic process GO:1903507 P negative regulation of nucleic acid-templated transcription
2435	O_BomoFB12192_5prime_partial:A_BomoFB_comp10174_c0_seq1 252bp	Bomo_Chr6
2436	O_BomoFB12193_3prime_partial:A_BomoFB_comp10174_c0_seq2 294bp	Bomo_Chr6	PREDICTED:_splicing_factor_1_isoform_X1_[Papilio_machaon]	GO:0000245 P spliceosomal complex assembly GO:0000389 P mRNA 3'-splice site recognition GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003714 F transcription corepressor activity GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005840 C ribosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008270 F zinc ion binding GO:0008380 P RNA splicing GO:0030238 P male sex determination GO:0033327 P Leydig cell differentiation GO:0042802 F identical protein binding GO:0044822 F RNA binding GO:0046872 F metal ion binding GO:0048662 P negative regulation of smooth muscle cell proliferation GO:0050810 P regulation of steroid biosynthetic process GO:1903507 P negative regulation of nucleic acid-templated transcription
2437	O_BomoFB12194_5prime_partial:A_BomoFB_comp10174_c0_seq2 252bp	Bomo_Chr6
2438	O_BomoFB12195_5prime_partial:A_BomoFB_comp10174_c0_seq3 101bp	Bomo_Chr6	PREDICTED:_cylicin-1_[Callithrix_jacchus]
2439	O_BomoFB12196_internal:A_BomoFB_comp10174_c0_seq4 320bp	Bomo_Chr6	PREDICTED:_splicing_factor_1_[Bombyx_mori]	GO:0000245 P spliceosomal complex assembly GO:0000389 P mRNA 3'-splice site recognition GO:0000398 P mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003714 F transcription corepressor activity GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005681 C spliceosomal complex GO:0005840 C ribosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006397 P mRNA processing GO:0008270 F zinc ion binding GO:0008380 P RNA splicing GO:0030238 P male sex determination GO:0033327 P Leydig cell differentiation GO:0042802 F identical protein binding GO:0044822 F RNA binding GO:0046872 F metal ion binding GO:0048662 P negative regulation of smooth muscle cell proliferation GO:0050810 P regulation of steroid biosynthetic process GO:1903507 P negative regulation of nucleic acid-templated transcription
2440	O_BomoFB12197_5prime_partial:A_BomoFB_comp10174_c0_seq4 252bp	Bomo_Chr6
2441	O_BomoFB12198_internal:A_BomoFB_comp10176_c0_seq1 291bp	Bomo_Chr21	PREDICTED:_uncharacterized_protein_LOC105392943_[Plutella_xylostella]	GO:0003964 F RNA-directed DNA polymerase activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0008152 P metabolic process GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
2442	O_BomoFB12199_5prime_partial:A_BomoFB_comp10176_c1_seq1 286bp	Bomo_Scaf011	PREDICTED:_uncharacterized_protein_LOC105841548_[Bombyx_mori]	GO:0003964 F RNA-directed DNA polymerase activity GO:0005575 C cellular_component GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006313 P transposition, DNA-mediated GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity
2443	O_BomoFB1219_3prime_partial:A_BomoFB_comp2997_c0_seq1 762bp	Bomo_Chr13	PREDICTED:_LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0004012 F ATPase-coupled intramembrane lipid transporter activity GO:0005524 F ATP binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0005886 C plasma membrane GO:0006810 P transport GO:0006812 P cation transport GO:0006869 P lipid transport GO:0008152 P metabolic process GO:0015914 P phospholipid transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0045332 P phospholipid translocation GO:0046872 F metal ion binding
2444	O_BomoFB121_3prime_partial:A_BomoFB_comp319_c0_seq1 135bp	Bomo_Chr6	PREDICTED:_synaptic_vesicle_2-related_protein-like_[Bombyx_mori]	GO:0006810 P transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
2445	O_BomoFB12200_complete:A_BomoFB_comp10178_c0_seq2 4815bp	Bomo_Chr1	PREDICTED:_kettin_protein_isoform_X1_[Bombyx_mori]	GO:0000794 C condensed nuclear chromosome GO:0003779 F actin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005737 C cytoplasm GO:0005863 C striated muscle myosin thick filament GO:0005875 C microtubule associated complex GO:0007049 P cell cycle GO:0007062 P sister chromatid cohesion GO:0007067 P mitotic cell cycle GO:0007076 P mitotic chromosome condensation GO:0007498 P mesoderm development GO:0007517 P muscle organ development GO:0007519 P skeletal muscle tissue development GO:0007520 P myoblast fusion GO:0007522 P visceral muscle development GO:0007525 P somatic muscle development GO:0008307 F structural constituent of muscle GO:0016203 P muscle attachment GO:0019233 P sensory perception of pain GO:0030017 C sarcomere GO:0030018 C Z disc GO:0031674 C I band GO:0035206 P regulation of hemocyte proliferation GO:0040011 P locomotion GO:0045214 P sarcomere organization GO:0051301 P cell division
2446	O_BomoFB12201_complete:A_BomoFB_comp10178_c0_seq2 222bp	Bomo_Chr1	4-coumarate--CoA_ligase_[Methylibium_sp._NZG]
2447	O_BomoFB12202_complete:A_BomoFB_comp10178_c0_seq2 208bp	Bomo_Chr1	membrane_protein_[Photobacterium_angustum]
2448	O_BomoFB12203_complete:A_BomoFB_comp10178_c0_seq2 131bp	Bomo_Chr1	hypothetical_protein_[Chelonobacter_oris]
2449	O_BomoFB12204_complete:A_BomoFB_comp10178_c0_seq2 102bp	Bomo_Chr1	hypothetical_protein_[Bradyrhizobium_elkanii]
2450	O_BomoFB12205_complete:A_BomoFB_comp10178_c0_seq2 100bp	Bomo_Chr1
2451	O_BomoFB12206_5prime_partial:A_BomoFB_comp10179_c0_seq1 142bp	Bomo_Scaf033	endonuclease-reverse_transcriptase_[Bombyx_mori]
2452	O_BomoFB12207_internal:A_BomoFB_comp10179_c0_seq2 140bp	Bomo_Scaf033	endonuclease-reverse_transcriptase_[Bombyx_mori]
2453	O_BomoFB12208_complete:A_BomoFB_comp10180_c0_seq1 227bp	Bomo_Chr25	PREDICTED:_transmembrane_protein_179_[Papilio_polytes]	GO:0003674 F molecular_function GO:0008150 P biological_process GO:0016020 C membrane GO:0016021 C integral component of membrane
2454	O_BomoFB12209_complete:A_BomoFB_comp10180_c0_seq2 154bp	Bomo_Chr25	PREDICTED:_transmembrane_protein_179_[Papilio_polytes]	GO:0016020 C membrane GO:0016021 C integral component of membrane
2455	O_BomoFB1220_complete:A_BomoFB_comp2997_c0_seq1 139bp	Bomo_Chr13	hypothetical_protein_XU18_4929_[Perkinsela_sp._CCAP_1560/4]
2456	O_BomoFB12210_complete:A_BomoFB_comp10180_c1_seq4 111bp	Bomo_Chr19	hydroxyacid_dehydrogenase_[Mycobacterium_gilvum]
2457	O_BomoFB12211_5prime_partial:A_BomoFB_comp10180_c1_seq5 133bp	Bomo_Scaf001	PREDICTED:_peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase_[Bombyx_mori]	GO:0000224 F peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006516 P glycoprotein catabolic process GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
2458	O_BomoFB12212_complete:A_BomoFB_comp10180_c1_seq5 128bp	Bomo_Scaf001	hypothetical_protein_[Geminocystis_herdmanii]
2459	O_BomoFB12213_5prime_partial:A_BomoFB_comp10180_c1_seq6 133bp	Bomo_Chr19	PREDICTED:_peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine_amidase_[Bombyx_mori]	GO:0000224 F peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006516 P glycoprotein catabolic process GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
2460	O_BomoFB12214_complete:A_BomoFB_comp10180_c1_seq6 128bp	Bomo_Chr19	hypothetical_protein_[Geminocystis_herdmanii]