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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
211 O_BomoFB10190_complete:A_BomoFB_comp9735_c0_seq2
270bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
212 O_BomoFB10191_5prime_partial:A_BomoFB_comp9735_c0_seq3
696bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
213 O_BomoFB10192_complete:A_BomoFB_comp9735_c0_seq3
270bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
214 O_BomoFB10193_complete:A_BomoFB_comp9736_c0_seq1
123bp
 PREDICTED:_bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
215 O_BomoFB10194_complete:A_BomoFB_comp9736_c0_seq2
139bp
 PREDICTED:_bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
216 O_BomoFB10195_complete:A_BomoFB_comp9737_c0_seq1
138bp
 PREDICTED:_cuticular_protein_RR-1_motif_6_isoform_X1_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
217 O_BomoFB10196_3prime_partial:A_BomoFB_comp9737_c0_seq2
150bp
 PREDICTED:_cuticular_protein_RR-1_motif_6_isoform_X1_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
218 O_BomoFB10197_5prime_partial:A_BomoFB_comp9737_c0_seq2
146bp
 hypothetical_protein_[Haloarcula_sp._SL3]
219 O_BomoFB10198_complete:A_BomoFB_comp9737_c0_seq3
1221bp
 TRAS3_[Bombyx_mori]
220 O_BomoFB10199_complete:A_BomoFB_comp9737_c0_seq3
187bp
 MULTISPECIES:_transporter_[Sphingopyxis]
221 O_BomoFB1019_3prime_partial:A_BomoFB_comp2814_c0_seq1
754bp
 PREDICTED:_bumetanide-sensitive_sodium-(potassium)-chloride_cotransporter-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006821 P chloride transport
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1902476 P chloride transmembrane transport
222 O_BomoFB101_internal:A_BomoFB_comp295_c0_seq1
195bp
 histidinol_dehydrogenase_[Mycobacterium_gilvum_PYR-GCK]
223 O_BomoFB10200_complete:A_BomoFB_comp9737_c0_seq3
179bp
 sulfur_oxidation_c-type_cytochrome_SoxX_[Thermocrinis_albus]
224 O_BomoFB10201_complete:A_BomoFB_comp9737_c0_seq3
171bp
 TRAS3_[Bombyx_mori]
225 O_BomoFB10202_complete:A_BomoFB_comp9737_c0_seq3
148bp
 hypothetical_protein_[Fischerella_sp._PCC_9431]
226 O_BomoFB10203_complete:A_BomoFB_comp9737_c0_seq3
138bp
 PREDICTED:_cuticular_protein_RR-1_motif_6_isoform_X1_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
227 O_BomoFB10204_complete:A_BomoFB_comp9737_c0_seq3
107bp
228 O_BomoFB10205_complete:A_BomoFB_comp9737_c0_seq3
107bp
 S-adenosylmethionine_synthetase_[Actinotignum_urinale]
229 O_BomoFB10206_complete:A_BomoFB_comp9738_c2_seq1
153bp
 PREDICTED:_apoptosis_regulatory_protein_Siva-like_[Amyelois_transitella]
GO:0001618 F virus receptor activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005175 F CD27 receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006915 P apoptotic process
GO:0006924 P activation-induced cell death of T cells
GO:0008270 F zinc ion binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
GO:1901030 P positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
230 O_BomoFB10207_5prime_partial:A_BomoFB_comp9739_c0_seq1
536bp
 PREDICTED:_kinesin_light_chain_isoform_X1_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
231 O_BomoFB10208_complete:A_BomoFB_comp9739_c0_seq1
407bp
 hypothetical_protein_BE17_34575_[Sorangium_cellulosum]
232 O_BomoFB10209_5prime_partial:A_BomoFB_comp9739_c0_seq2
565bp
 PREDICTED:_kinesin_light_chain_isoform_X1_[Bombyx_mori]
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0046843 P dorsal appendage formation
GO:0051726 P regulation of cell cycle
233 O_BomoFB1020_complete:A_BomoFB_comp2814_c0_seq1
119bp
 hypothetical_protein_TRIADDRAFT_51950_[Trichoplax_adhaerens]
234 O_BomoFB10210_complete:A_BomoFB_comp9739_c0_seq2
407bp
 hypothetical_protein_BE17_34575_[Sorangium_cellulosum]
235 O_BomoFB10211_complete:A_BomoFB_comp9741_c0_seq1
813bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX23_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000354 P cis assembly of pre-catalytic spliceosome
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
236 O_BomoFB10212_complete:A_BomoFB_comp9741_c0_seq1
217bp
 uncharacterized_protein_BN745_02520_[Klebsiella_variicola_CAG:634]
237 O_BomoFB10213_complete:A_BomoFB_comp9741_c0_seq1
131bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX23_isoform_X2_[Callithrix_jacchus]
238 O_BomoFB10214_5prime_partial:A_BomoFB_comp9742_c0_seq1
313bp
 PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
239 O_BomoFB10215_complete:A_BomoFB_comp9742_c0_seq1
161bp
 uncharacterized_protein_LOC778510_[Bombyx_mori]
240 O_BomoFB10216_complete:A_BomoFB_comp9744_c0_seq1
515bp
 Hrp59_protein_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031012 C extracellular matrix
GO:0042382 C paraspeckles
GO:0044822 F RNA binding
GO:0048306 F calcium-dependent protein binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
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