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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
241 O_BomoFB10217_complete:A_BomoFB_comp9744_c0_seq1
112bp
 hypothetical_protein_CSIM01_13232_[Colletotrichum_simmondsii]
242 O_BomoFB10218_5prime_partial:A_BomoFB_comp9744_c0_seq2
518bp
 PREDICTED:_myelin_expression_factor_2-like_isoform_X2_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031012 C extracellular matrix
GO:0042382 C paraspeckles
GO:0044822 F RNA binding
GO:0048306 F calcium-dependent protein binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
243 O_BomoFB10219_complete:A_BomoFB_comp9744_c0_seq2
112bp
 hypothetical_protein_CSIM01_13232_[Colletotrichum_simmondsii]
244 O_BomoFB1021_complete:A_BomoFB_comp2814_c0_seq1
113bp
245 O_BomoFB10220_complete:A_BomoFB_comp9744_c0_seq3
506bp
 Hrp59_protein_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031012 C extracellular matrix
GO:0042382 C paraspeckles
GO:0044822 F RNA binding
GO:0048306 F calcium-dependent protein binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
246 O_BomoFB10221_complete:A_BomoFB_comp9744_c0_seq3
112bp
 hypothetical_protein_CSIM01_13232_[Colletotrichum_simmondsii]
247 O_BomoFB10222_5prime_partial:A_BomoFB_comp9744_c0_seq4
527bp
 Hrp59_protein_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031012 C extracellular matrix
GO:0042382 C paraspeckles
GO:0044822 F RNA binding
GO:0048306 F calcium-dependent protein binding
GO:0070062 C extracellular exosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
248 O_BomoFB10223_complete:A_BomoFB_comp9744_c0_seq4
112bp
 hypothetical_protein_CSIM01_13232_[Colletotrichum_simmondsii]
249 O_BomoFB10224_complete:A_BomoFB_comp9747_c0_seq1
463bp
 PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
250 O_BomoFB10225_complete:A_BomoFB_comp9747_c0_seq1
184bp
 PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
251 O_BomoFB10226_complete:A_BomoFB_comp9747_c0_seq1
146bp
 C6_transcription_factor,_putative_[Metarhizium_acridum_CQMa_102]
252 O_BomoFB10227_complete:A_BomoFB_comp9747_c0_seq2
370bp
 PREDICTED:_mannose-1-phosphate_guanyltransferase_beta-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0004475 F mannose-1-phosphate guanylyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0009058 P biosynthetic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0035167 P larval lymph gland hemopoiesis
253 O_BomoFB10228_3prime_partial:A_BomoFB_comp9749_c0_seq1
355bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
254 O_BomoFB10229_5prime_partial:A_BomoFB_comp9749_c0_seq1
111bp
 PREDICTED:_ribonucleases_P/MRP_protein_subunit_POP1_[Myotis_lucifugus]
255 O_BomoFB1022_complete:A_BomoFB_comp2814_c0_seq1
103bp
 hypothetical_protein_X975_18506,_partial_[Stegodyphus_mimosarum]
256 O_BomoFB10230_5prime_partial:A_BomoFB_comp9749_c0_seq1
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
257 O_BomoFB10231_3prime_partial:A_BomoFB_comp9749_c0_seq2
351bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
258 O_BomoFB10232_5prime_partial:A_BomoFB_comp9749_c0_seq2
111bp
 PREDICTED:_ribonucleases_P/MRP_protein_subunit_POP1_[Myotis_lucifugus]
259 O_BomoFB10233_5prime_partial:A_BomoFB_comp9749_c0_seq2
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
260 O_BomoFB10234_3prime_partial:A_BomoFB_comp9749_c0_seq3
357bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
261 O_BomoFB10235_5prime_partial:A_BomoFB_comp9749_c0_seq3
117bp
 PREDICTED:_ribonucleases_P/MRP_protein_subunit_POP1_[Myotis_lucifugus]
262 O_BomoFB10236_5prime_partial:A_BomoFB_comp9749_c0_seq3
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
263 O_BomoFB10237_3prime_partial:A_BomoFB_comp9749_c0_seq4
361bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
264 O_BomoFB10238_5prime_partial:A_BomoFB_comp9749_c0_seq4
117bp
 PREDICTED:_ribonucleases_P/MRP_protein_subunit_POP1_[Myotis_lucifugus]
265 O_BomoFB10239_5prime_partial:A_BomoFB_comp9749_c0_seq4
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
266 O_BomoFB1023_3prime_partial:A_BomoFB_comp2817_c0_seq1
613bp
 PREDICTED:_uncharacterized_protein_LOC101738424_[Bombyx_mori]
267 O_BomoFB10240_3prime_partial:A_BomoFB_comp9749_c0_seq5
187bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
268 O_BomoFB10241_5prime_partial:A_BomoFB_comp9749_c0_seq5
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
269 O_BomoFB10242_3prime_partial:A_BomoFB_comp9749_c0_seq6
183bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
270 O_BomoFB10243_5prime_partial:A_BomoFB_comp9749_c0_seq6
110bp
 PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
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