SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/25536
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
181 O_BomoFB10163_complete:A_BomoFB_comp9721_c0_seq1
542bp
 PREDICTED:_A-kinase_anchor_protein_10,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0008104 P protein localization
GO:0016020 C membrane
GO:0051018 F protein kinase A binding
182 O_BomoFB10164_complete:A_BomoFB_comp9722_c0_seq1
508bp
 PREDICTED:_BAG_domain-containing_protein_Samui_isoform_X2_[Bombyx_mori]
GO:0007275 P multicellular organism development
GO:0030544 F Hsp70 protein binding
GO:0051087 F chaperone binding
183 O_BomoFB10165_complete:A_BomoFB_comp9722_c0_seq1
147bp
184 O_BomoFB10166_complete:A_BomoFB_comp9723_c0_seq1
116bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF181-like_isoform_X2_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
185 O_BomoFB10167_complete:A_BomoFB_comp9723_c0_seq2
130bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SDIR1-like_isoform_X1_[Papilio_polytes]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0038018 P Wnt receptor catabolic process
GO:0046872 F metal ion binding
GO:0072089 P stem cell proliferation
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
186 O_BomoFB10168_5prime_partial:A_BomoFB_comp9726_c1_seq1
731bp
 PREDICTED:_sorting_nexin-13-like_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
187 O_BomoFB10169_complete:A_BomoFB_comp9726_c1_seq1
114bp
 PREDICTED:_phenolic_glucoside_malonyltransferase_2-like_[Brassica_rapa]
188 O_BomoFB1016_complete:A_BomoFB_comp2809_c0_seq1
139bp
 PREDICTED:_N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase_[Ornithorhynchus_anatinus]
189 O_BomoFB10170_5prime_partial:A_BomoFB_comp9726_c1_seq2
700bp
 PREDICTED:_sorting_nexin-13-like_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
190 O_BomoFB10171_complete:A_BomoFB_comp9727_c0_seq1
469bp
 PREDICTED:_tubulin_beta_chain-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
191 O_BomoFB10172_complete:A_BomoFB_comp9727_c0_seq2
452bp
 PREDICTED:_tubulin_beta_chain-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
192 O_BomoFB10173_complete:A_BomoFB_comp9727_c0_seq3
302bp
 PREDICTED:_tubulin_beta_chain-like_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0008152 P metabolic process
193 O_BomoFB10174_5prime_partial:A_BomoFB_comp9728_c0_seq1
107bp
 PREDICTED:_uncharacterized_protein_LOC105842439_[Bombyx_mori]
194 O_BomoFB10175_internal:A_BomoFB_comp9729_c0_seq1
156bp
 hypothetical_protein_RR48_15119_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
195 O_BomoFB10176_complete:A_BomoFB_comp9730_c0_seq2
184bp
 PREDICTED:_aurora_kinase_B_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000780 C condensed chromosome, centromeric region
GO:0000920 P septum digestion after cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005876 C spindle microtubule
GO:0006325 P chromatin organization
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030496 C midbody
GO:0031577 P spindle checkpoint signaling
GO:0031616 C spindle pole centrosome
GO:0032133 C chromosome passenger complex
GO:0032465 P regulation of cytokinesis
GO:0032467 P positive regulation of cytokinesis
GO:0035174 F histone serine kinase activity
GO:0043988 P histone H3-S28 phosphorylation
GO:0046872 F metal ion binding
GO:0048132 P female germ-line stem cell asymmetric division
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0090307 P mitotic spindle assembly
GO:1990385 C meiotic spindle midzone
196 O_BomoFB10177_complete:A_BomoFB_comp9730_c0_seq4
191bp
 PREDICTED:_aurora_kinase_B_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000780 C condensed chromosome, centromeric region
GO:0000920 P septum digestion after cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005876 C spindle microtubule
GO:0006325 P chromatin organization
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0008608 P attachment of spindle microtubules to kinetochore
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030496 C midbody
GO:0031577 P spindle checkpoint signaling
GO:0031616 C spindle pole centrosome
GO:0032133 C chromosome passenger complex
GO:0032465 P regulation of cytokinesis
GO:0032467 P positive regulation of cytokinesis
GO:0035174 F histone serine kinase activity
GO:0043988 P histone H3-S28 phosphorylation
GO:0046872 F metal ion binding
GO:0048132 P female germ-line stem cell asymmetric division
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0090307 P mitotic spindle assembly
GO:1990385 C meiotic spindle midzone
197 O_BomoFB10178_5prime_partial:A_BomoFB_comp9732_c0_seq2
319bp
 PREDICTED:_uncharacterized_protein_LOC105841867_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
198 O_BomoFB10179_complete:A_BomoFB_comp9733_c0_seq1
343bp
 PREDICTED:_uncharacterized_protein_LOC106139030_[Amyelois_transitella]
199 O_BomoFB1017_complete:A_BomoFB_comp2809_c0_seq1
108bp
 ketol-acid_reductoisomerase_[Aeromicrobium_sp._Root472D3]
200 O_BomoFB10180_complete:A_BomoFB_comp9733_c0_seq2
147bp
 PREDICTED:_uncharacterized_protein_LOC106139030_[Amyelois_transitella]
201 O_BomoFB10181_complete:A_BomoFB_comp9733_c1_seq1
381bp
 PREDICTED:_protein_phosphatase_1B_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006499 P N-terminal protein myristoylation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0032688 P negative regulation of interferon-beta production
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0050687 P negative regulation of defense response to virus
202 O_BomoFB10182_complete:A_BomoFB_comp9733_c1_seq1
136bp
 Os03g0268750_[Oryza_sativa_Japonica_Group]
203 O_BomoFB10183_complete:A_BomoFB_comp9733_c1_seq1
119bp
 ATPase,_P-type_(transporting),_HAD_superfamily,_subfamily_IC_[Afipia_sp._1NLS2]
204 O_BomoFB10184_complete:A_BomoFB_comp9733_c1_seq2
381bp
 PREDICTED:_protein_phosphatase_1B_[Amyelois_transitella]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006499 P N-terminal protein myristoylation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0032688 P negative regulation of interferon-beta production
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0050687 P negative regulation of defense response to virus
205 O_BomoFB10185_complete:A_BomoFB_comp9733_c1_seq2
136bp
 Os03g0268750_[Oryza_sativa_Japonica_Group]
206 O_BomoFB10186_complete:A_BomoFB_comp9733_c1_seq2
119bp
 ATPase,_P-type_(transporting),_HAD_superfamily,_subfamily_IC_[Afipia_sp._1NLS2]
207 O_BomoFB10187_complete:A_BomoFB_comp9735_c0_seq1
774bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
208 O_BomoFB10188_complete:A_BomoFB_comp9735_c0_seq1
270bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
209 O_BomoFB10189_complete:A_BomoFB_comp9735_c0_seq2
774bp
 PREDICTED:_uncharacterized_protein_LOC101745080_isoform_X4_[Bombyx_mori]
210 O_BomoFB1018_internal:A_BomoFB_comp2813_c0_seq1
167bp
 PREDICTED:_uncharacterized_protein_LOC101741863_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0046872 F metal ion binding
previous next from show/25536

- SilkBase 1999-2023 -