Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1471	O_BomoFB11324_complete:A_BomoFB_comp10008_c0_seq1 106bp	Bomo_Chr26	Uncharacterised_protein_[Mycobacterium_abscessus]
1472	O_BomoFB11325_complete:A_BomoFB_comp10008_c0_seq1 100bp	Bomo_Chr26	PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1473	O_BomoFB11326_complete:A_BomoFB_comp10008_c0_seq2 1052bp	Bomo_Chr26	MLE_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0000785 C chromatin GO:0000805 C X chromosome GO:0003676 F nucleic acid binding GO:0003682 F chromatin binding GO:0003723 F RNA binding GO:0003724 F RNA helicase activity GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007549 P dosage compensation GO:0008026 F helicase activity GO:0008340 P determination of adult lifespan GO:0009047 P dosage compensation by hyperactivation of X chromosome GO:0016456 C X chromosome located dosage compensation complex, transcription activating GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome GO:0016787 F hydrolase activity GO:0031453 P positive regulation of heterochromatin assembly GO:0044822 F RNA binding GO:0045433 P male courtship behavior, veined wing generated song production GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048675 P axon extension GO:0072487 C MSL complex
1474	O_BomoFB11327_complete:A_BomoFB_comp10008_c0_seq2 148bp	Bomo_Chr26	zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1475	O_BomoFB11328_complete:A_BomoFB_comp10008_c0_seq2 144bp	Bomo_Chr26	hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1476	O_BomoFB11329_complete:A_BomoFB_comp10008_c0_seq2 113bp	Bomo_Chr26	hypothetical_protein_FF36_04279_[Frankia_sp._CpI1-S]
1477	O_BomoFB1132_3prime_partial:A_BomoFB_comp2922_c0_seq1 284bp	Bomo_Chr10	PREDICTED:_RNA_binding_protein_fox-1_homolog_1-like_isoform_X3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0043484 P regulation of RNA splicing
1478	O_BomoFB11330_complete:A_BomoFB_comp10008_c0_seq2 106bp	Bomo_Chr26	Uncharacterised_protein_[Mycobacterium_abscessus]
1479	O_BomoFB11331_complete:A_BomoFB_comp10008_c0_seq2 100bp	Bomo_Chr26	PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1480	O_BomoFB11332_5prime_partial:A_BomoFB_comp10008_c0_seq3 838bp	Bomo_Chr26	MLE_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0000785 C chromatin GO:0000805 C X chromosome GO:0003676 F nucleic acid binding GO:0003682 F chromatin binding GO:0003723 F RNA binding GO:0003724 F RNA helicase activity GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007549 P dosage compensation GO:0008026 F helicase activity GO:0008340 P determination of adult lifespan GO:0009047 P dosage compensation by hyperactivation of X chromosome GO:0016456 C X chromosome located dosage compensation complex, transcription activating GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome GO:0016787 F hydrolase activity GO:0031453 P positive regulation of heterochromatin assembly GO:0044822 F RNA binding GO:0045433 P male courtship behavior, veined wing generated song production GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048675 P axon extension GO:0072487 C MSL complex
1481	O_BomoFB11333_complete:A_BomoFB_comp10008_c0_seq3 148bp	Bomo_Chr26	zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1482	O_BomoFB11334_complete:A_BomoFB_comp10008_c0_seq3 119bp	Bomo_Chr26	Adhesive_plaque_matrix_protein_[Myotis_brandtii]
1483	O_BomoFB11335_complete:A_BomoFB_comp10008_c0_seq3 106bp	Bomo_Chr26	Uncharacterised_protein_[Mycobacterium_abscessus]
1484	O_BomoFB11336_complete:A_BomoFB_comp10008_c0_seq3 100bp	Bomo_Chr26	PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1485	O_BomoFB11337_5prime_partial:A_BomoFB_comp10008_c0_seq4 832bp	Bomo_Chr26	MLE_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0000785 C chromatin GO:0000805 C X chromosome GO:0003676 F nucleic acid binding GO:0003682 F chromatin binding GO:0003723 F RNA binding GO:0003724 F RNA helicase activity GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007549 P dosage compensation GO:0008026 F helicase activity GO:0008340 P determination of adult lifespan GO:0009047 P dosage compensation by hyperactivation of X chromosome GO:0016456 C X chromosome located dosage compensation complex, transcription activating GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome GO:0016787 F hydrolase activity GO:0031453 P positive regulation of heterochromatin assembly GO:0044822 F RNA binding GO:0045433 P male courtship behavior, veined wing generated song production GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048675 P axon extension GO:0072487 C MSL complex
1486	O_BomoFB11338_complete:A_BomoFB_comp10008_c0_seq4 148bp	Bomo_Chr26	zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1487	O_BomoFB11339_complete:A_BomoFB_comp10008_c0_seq4 113bp	Bomo_Chr26	hypothetical_protein_FF36_04279_[Frankia_sp._CpI1-S]
1488	O_BomoFB1133_5prime_partial:A_BomoFB_comp2922_c0_seq1 109bp	Bomo_Chr10	PREDICTED:_ecotropic_viral_integration_site_5_protein_homolog_isoform_X1_[Chelonia_mydas]
1489	O_BomoFB11340_complete:A_BomoFB_comp10008_c0_seq4 106bp	Bomo_Chr26	Uncharacterised_protein_[Mycobacterium_abscessus]
1490	O_BomoFB11341_complete:A_BomoFB_comp10008_c0_seq4 100bp	Bomo_Chr26	PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1491	O_BomoFB11342_complete:A_BomoFB_comp10008_c0_seq5 1058bp	Bomo_Chr26	MLE_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0000785 C chromatin GO:0000805 C X chromosome GO:0003676 F nucleic acid binding GO:0003682 F chromatin binding GO:0003723 F RNA binding GO:0003724 F RNA helicase activity GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007549 P dosage compensation GO:0008026 F helicase activity GO:0008340 P determination of adult lifespan GO:0009047 P dosage compensation by hyperactivation of X chromosome GO:0016456 C X chromosome located dosage compensation complex, transcription activating GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome GO:0016787 F hydrolase activity GO:0031453 P positive regulation of heterochromatin assembly GO:0044822 F RNA binding GO:0045433 P male courtship behavior, veined wing generated song production GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048675 P axon extension GO:0072487 C MSL complex
1492	O_BomoFB11343_complete:A_BomoFB_comp10008_c0_seq5 148bp	Bomo_Chr26	zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1493	O_BomoFB11344_complete:A_BomoFB_comp10008_c0_seq5 144bp	Bomo_Chr26	hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1494	O_BomoFB11345_complete:A_BomoFB_comp10008_c0_seq5 119bp	Bomo_Chr26	Adhesive_plaque_matrix_protein_[Myotis_brandtii]
1495	O_BomoFB11346_complete:A_BomoFB_comp10008_c0_seq5 106bp	Bomo_Chr26	Uncharacterised_protein_[Mycobacterium_abscessus]
1496	O_BomoFB11347_complete:A_BomoFB_comp10008_c0_seq5 100bp	Bomo_Chr26	PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1497	O_BomoFB11348_complete:A_BomoFB_comp10008_c0_seq6 1309bp	Bomo_Chr26	MLE_protein_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000228 C nuclear chromosome GO:0000785 C chromatin GO:0000805 C X chromosome GO:0003676 F nucleic acid binding GO:0003682 F chromatin binding GO:0003723 F RNA binding GO:0003724 F RNA helicase activity GO:0003725 F double-stranded RNA binding GO:0004004 F RNA helicase activity GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005665 C RNA polymerase II, core complex GO:0005694 C chromosome GO:0005700 C polytene chromosome GO:0005737 C cytoplasm GO:0006396 P RNA processing GO:0007549 P dosage compensation GO:0008026 F helicase activity GO:0008340 P determination of adult lifespan GO:0009047 P dosage compensation by hyperactivation of X chromosome GO:0016456 C X chromosome located dosage compensation complex, transcription activating GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome GO:0016787 F hydrolase activity GO:0031453 P positive regulation of heterochromatin assembly GO:0044822 F RNA binding GO:0045433 P male courtship behavior, veined wing generated song production GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048675 P axon extension GO:0072487 C MSL complex
1498	O_BomoFB11349_complete:A_BomoFB_comp10008_c0_seq6 148bp	Bomo_Chr26	zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1499	O_BomoFB1134_complete:A_BomoFB_comp2925_c0_seq1 1831bp	Bomo_Chr17	PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X1_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0001075 F RNA polymerase II general transcription initiation factor activity GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly GO:0003677 F DNA binding GO:0004402 F histone acetyltransferase activity GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005669 C transcription factor TFIID complex GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006352 P DNA-templated transcription, initiation GO:0006355 P regulation of transcription, DNA-templated GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006461 P protein-containing complex assembly GO:0006468 P protein phosphorylation GO:0007049 P cell cycle GO:0007221 P positive regulation of transcription of Notch receptor target GO:0008134 F transcription factor binding GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016573 P histone acetylation GO:0016740 F transferase activity GO:0022008 P neurogenesis GO:0043565 F sequence-specific DNA binding GO:0044212 F transcription cis-regulatory region binding GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046425 P regulation of receptor signaling pathway via JAK-STAT GO:0051123 P RNA polymerase II preinitiation complex assembly GO:0051726 P regulation of cell cycle GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
1500	O_BomoFB11350_complete:A_BomoFB_comp10008_c0_seq6 144bp	Bomo_Chr26	hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]