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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1501 O_BomoFB11351_complete:A_BomoFB_comp10008_c0_seq6
113bp
 hypothetical_protein_FF36_04279_[Frankia_sp._CpI1-S]
1502 O_BomoFB11352_complete:A_BomoFB_comp10008_c0_seq6
106bp
 Uncharacterised_protein_[Mycobacterium_abscessus]
1503 O_BomoFB11353_complete:A_BomoFB_comp10008_c0_seq6
100bp
 PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1504 O_BomoFB11354_complete:A_BomoFB_comp10009_c0_seq1
496bp
 PREDICTED:_hyccin_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1505 O_BomoFB11355_complete:A_BomoFB_comp10009_c0_seq1
208bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_caprin-2_[Columba_livia]
1506 O_BomoFB11356_complete:A_BomoFB_comp10009_c0_seq2
364bp
 PREDICTED:_hyccin_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1507 O_BomoFB11357_3prime_partial:A_BomoFB_comp10010_c0_seq1
506bp
 PREDICTED:_uncharacterized_protein_LOC101747151_isoform_X2_[Bombyx_mori]
1508 O_BomoFB11358_3prime_partial:A_BomoFB_comp10011_c0_seq1
1191bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
1509 O_BomoFB11359_5prime_partial:A_BomoFB_comp10011_c0_seq1
162bp
 conserved_Plasmodium_protein,_unknown_function_[Plasmodium_chabaudi_chabaudi]
1510 O_BomoFB1135_complete:A_BomoFB_comp2925_c0_seq1
195bp
 hypothetical_protein_[Vibrio_parahaemolyticus]
1511 O_BomoFB11360_complete:A_BomoFB_comp10011_c0_seq1
131bp
 putative_exo-beta-1,3-glucanase_[Moniliophthora_roreri]
1512 O_BomoFB11361_3prime_partial:A_BomoFB_comp10011_c0_seq2
205bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
1513 O_BomoFB11362_complete:A_BomoFB_comp10012_c0_seq1
131bp
 PREDICTED:_TBP-associated_factor_13_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
1514 O_BomoFB11363_complete:A_BomoFB_comp10012_c0_seq1
112bp
 putative_malic_acid_transport_protein_[Diaporthe_ampelina]
1515 O_BomoFB11364_complete:A_BomoFB_comp10012_c0_seq3
130bp
 TBP-associated_factor_13_isoform_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
1516 O_BomoFB11365_complete:A_BomoFB_comp10012_c0_seq4
100bp
 30S_ribosomal_protein_S3,_partial_[Salmonella_enterica_subsp._enterica_serovar_Miami_str._1923]
1517 O_BomoFB11366_complete:A_BomoFB_comp10012_c0_seq5
127bp
 TBP-associated_factor_13_isoform_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
1518 O_BomoFB11367_complete:A_BomoFB_comp10012_c0_seq6
120bp
 amino_acid_permease_[Arenibacter_latericius]
1519 O_BomoFB11368_complete:A_BomoFB_comp10014_c0_seq1
393bp
 PREDICTED:_glycosylated_lysosomal_membrane_protein_A-like_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1520 O_BomoFB11369_complete:A_BomoFB_comp10014_c0_seq2
393bp
 PREDICTED:_glycosylated_lysosomal_membrane_protein_A-like_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1521 O_BomoFB1136_complete:A_BomoFB_comp2925_c0_seq1
167bp
 integrase,_partial_[uncultured_bacterium]
1522 O_BomoFB11370_complete:A_BomoFB_comp10014_c0_seq3
393bp
 PREDICTED:_glycosylated_lysosomal_membrane_protein_A-like_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1523 O_BomoFB11371_complete:A_BomoFB_comp10014_c0_seq3
109bp
 hypothetical_protein_[Pectobacterium_carotovorum]
1524 O_BomoFB11372_complete:A_BomoFB_comp10014_c0_seq4
393bp
 PREDICTED:_glycosylated_lysosomal_membrane_protein_A-like_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1525 O_BomoFB11373_complete:A_BomoFB_comp10014_c0_seq4
115bp
1526 O_BomoFB11374_5prime_partial:A_BomoFB_comp10016_c0_seq1
1280bp
 PREDICTED:_transcription_activator_BRG1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
1527 O_BomoFB11375_complete:A_BomoFB_comp10016_c0_seq1
118bp
1528 O_BomoFB11376_complete:A_BomoFB_comp10016_c0_seq1
100bp
 catabolite_control_protein_A_[Arthrobacter_sp._Hiyo1]
1529 O_BomoFB11377_3prime_partial:A_BomoFB_comp10017_c0_seq1
3130bp
 PREDICTED:_dynein_heavy_chain,_cytoplasmic_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
1530 O_BomoFB11378_complete:A_BomoFB_comp10017_c0_seq1
125bp
 hypothetical_protein_POPTR_0001s30800g_[Populus_trichocarpa]
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