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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1321 O_BomoFB1118_complete:A_BomoFB_comp2904_c1_seq1
370bp
 elongation_protein_4-like_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0008607 F phosphorylase kinase regulator activity
GO:0033588 C elongator holoenzyme complex
GO:0045859 P regulation of protein kinase activity
1322 O_BomoFB11190_5prime_partial:A_BomoFB_comp9982_c1_seq3
209bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1323 O_BomoFB11191_complete:A_BomoFB_comp9983_c0_seq1
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
1324 O_BomoFB11192_complete:A_BomoFB_comp9983_c0_seq1
105bp
 Pre-mRNA-processing-splicing_factor_8_[Trichinella_nelsoni]
1325 O_BomoFB11193_complete:A_BomoFB_comp9983_c0_seq3
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
1326 O_BomoFB11194_complete:A_BomoFB_comp9983_c0_seq3
105bp
 Pre-mRNA-processing-splicing_factor_8_[Trichinella_nelsoni]
1327 O_BomoFB11195_complete:A_BomoFB_comp9983_c0_seq4
259bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_A_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
1328 O_BomoFB11196_complete:A_BomoFB_comp9983_c0_seq4
105bp
 Pre-mRNA-processing-splicing_factor_8_[Trichinella_nelsoni]
1329 O_BomoFB11197_complete:A_BomoFB_comp9983_c0_seq6
222bp
 ORAI_calcium_release-activated_calcium_modulator_1_isoform_B_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
1330 O_BomoFB11198_complete:A_BomoFB_comp9983_c0_seq6
105bp
 Pre-mRNA-processing-splicing_factor_8_[Trichinella_nelsoni]
1331 O_BomoFB11199_internal:A_BomoFB_comp9984_c0_seq1
929bp
 Bm8_interacting_protein_precursor_[Bombyx_mori]
GO:0000137 C Golgi cis cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0033363 P secretory granule organization
GO:0051047 P positive regulation of secretion
GO:0070971 C endoplasmic reticulum exit site
1332 O_BomoFB1119_5prime_partial:A_BomoFB_comp2907_c0_seq1
406bp
 PREDICTED:_phosphatidylserine_synthase_1_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
1333 O_BomoFB111_internal:A_BomoFB_comp304_c0_seq1
140bp
 hypothetical_protein_[Nocardioides_sp._UNC345MFTsu5.1]
1334 O_BomoFB11200_internal:A_BomoFB_comp9985_c0_seq1
313bp
 PREDICTED:_interleukin_enhancer_binding_factor_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1335 O_BomoFB11201_3prime_partial:A_BomoFB_comp9985_c0_seq2
307bp
 PREDICTED:_interleukin_enhancer_binding_factor_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006955 P immune response
GO:0016740 F transferase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1336 O_BomoFB11202_complete:A_BomoFB_comp9985_c0_seq2
267bp
 PREDICTED:_NAD(P)H-hydrate_epimerase_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
1337 O_BomoFB11203_complete:A_BomoFB_comp9985_c0_seq3
244bp
 PREDICTED:_NAD(P)H-hydrate_epimerase_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
1338 O_BomoFB11204_5prime_partial:A_BomoFB_comp9986_c0_seq1
1759bp
 PREDICTED:_spatacsin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007409 P axonogenesis
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048167 P regulation of synaptic plasticity
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
1339 O_BomoFB11205_5prime_partial:A_BomoFB_comp9986_c0_seq2
268bp
 PREDICTED:_spatacsin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007409 P axonogenesis
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048167 P regulation of synaptic plasticity
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
1340 O_BomoFB11206_3prime_partial:A_BomoFB_comp9986_c1_seq1
190bp
 PREDICTED:_spatacsin_[Bombyx_mori]
1341 O_BomoFB11207_complete:A_BomoFB_comp9987_c0_seq1
359bp
 PREDICTED:_splicing_regulatory_glutamine/lysine-rich_protein_1_[Amyelois_transitella]
1342 O_BomoFB11208_complete:A_BomoFB_comp9987_c0_seq1
288bp
 PREDICTED:_uncharacterized_protein_LOC106139693_isoform_X1_[Amyelois_transitella]
1343 O_BomoFB11209_complete:A_BomoFB_comp9987_c0_seq1
165bp
 PREDICTED:_uncharacterized_protein_LOC107452305_[Parasteatoda_tepidariorum]
1344 O_BomoFB1120_complete:A_BomoFB_comp2907_c0_seq1
122bp
 hypothetical_protein,_variant_1_[Aphanomyces_astaci]
1345 O_BomoFB11210_complete:A_BomoFB_comp9987_c0_seq1
101bp
 N-acyl-D-glucosamine_2-epimerase_[Xylanimonas_cellulosilytica]
1346 O_BomoFB11211_complete:A_BomoFB_comp9987_c0_seq1
100bp
 hypothetical_protein_[Paenibacillus_ginsengihumi]
1347 O_BomoFB11212_5prime_partial:A_BomoFB_comp9988_c0_seq1
212bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1348 O_BomoFB11213_complete:A_BomoFB_comp9990_c0_seq1
686bp
 putative_fatty_acid_transport_protein_FATP2_[Spodoptera_litura]
GO:0000038 P very long-chain fatty acid metabolic process
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031526 C brush border membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0042760 P very long-chain fatty acid catabolic process
GO:0043588 P skin development
GO:0044539 P long-chain fatty acid import into cell
1349 O_BomoFB11214_complete:A_BomoFB_comp9990_c0_seq2
700bp
 fatty_acid_transport_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031957 F very long-chain fatty acid-CoA ligase activity
1350 O_BomoFB11215_complete:A_BomoFB_comp9990_c0_seq3
685bp
 putative_fatty_acid_transport_protein_FATP2_[Spodoptera_litura]
GO:0000038 P very long-chain fatty acid metabolic process
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031526 C brush border membrane
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0042760 P very long-chain fatty acid catabolic process
GO:0043588 P skin development
GO:0044539 P long-chain fatty acid import into cell
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