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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1291 O_BomoFB11162_3prime_partial:A_BomoFB_comp9975_c0_seq1
164bp
 hypothetical_protein_FOVG_16617_[Fusarium_oxysporum_f._sp._pisi_HDV247]
1292 O_BomoFB11163_complete:A_BomoFB_comp9975_c0_seq1
158bp
1293 O_BomoFB11164_complete:A_BomoFB_comp9975_c0_seq1
145bp
1294 O_BomoFB11165_complete:A_BomoFB_comp9975_c0_seq1
131bp
 hypothetical_protein_SNOG_15175_[Parastagonospora_nodorum_SN15]
1295 O_BomoFB11166_complete:A_BomoFB_comp9975_c0_seq1
111bp
 Tat_binding_protein_1TBP-1-interacting_protein_TBPIP_[Blumeria_graminis_f._sp._tritici_96224]
1296 O_BomoFB11167_complete:A_BomoFB_comp9975_c0_seq2
1970bp
 putative_Chromodomain_helicase-DNA-binding_protein_Mi-2-like_protein_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
1297 O_BomoFB11168_3prime_partial:A_BomoFB_comp9975_c0_seq2
164bp
 hypothetical_protein_FOVG_16617_[Fusarium_oxysporum_f._sp._pisi_HDV247]
1298 O_BomoFB11169_complete:A_BomoFB_comp9975_c0_seq2
158bp
1299 O_BomoFB1116_complete:A_BomoFB_comp2901_c0_seq1
106bp
 Unknown_protein_[Oryza_sativa_Japonica_Group]
1300 O_BomoFB11170_complete:A_BomoFB_comp9975_c0_seq2
145bp
1301 O_BomoFB11171_complete:A_BomoFB_comp9975_c0_seq2
131bp
 hypothetical_protein_SNOG_15175_[Parastagonospora_nodorum_SN15]
1302 O_BomoFB11172_complete:A_BomoFB_comp9975_c0_seq2
111bp
 Tat_binding_protein_1TBP-1-interacting_protein_TBPIP_[Blumeria_graminis_f._sp._tritici_96224]
1303 O_BomoFB11173_complete:A_BomoFB_comp9977_c0_seq1
841bp
 PREDICTED:_97_kDa_heat_shock_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
1304 O_BomoFB11174_complete:A_BomoFB_comp9977_c0_seq2
815bp
 PREDICTED:_97_kDa_heat_shock_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
1305 O_BomoFB11175_complete:A_BomoFB_comp9978_c0_seq1
458bp
 PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
1306 O_BomoFB11176_complete:A_BomoFB_comp9978_c0_seq1
150bp
1307 O_BomoFB11177_complete:A_BomoFB_comp9978_c0_seq2
351bp
 PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
1308 O_BomoFB11178_complete:A_BomoFB_comp9978_c0_seq2
150bp
1309 O_BomoFB11179_complete:A_BomoFB_comp9978_c0_seq3
462bp
 PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
1310 O_BomoFB1117_3prime_partial:A_BomoFB_comp2903_c0_seq1
373bp
 PREDICTED:_p21-activated_protein_kinase-interacting_protein_1-like_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0009968 P negative regulation of signal transduction
1311 O_BomoFB11180_complete:A_BomoFB_comp9978_c0_seq3
150bp
1312 O_BomoFB11181_complete:A_BomoFB_comp9978_c1_seq1
102bp
 hypothetical_protein_KGM_13702_[Danaus_plexippus]
GO:0003700 F DNA-binding transcription factor activity
GO:0006355 P regulation of transcription, DNA-templated
GO:0006970 P response to osmotic stress
1313 O_BomoFB11182_5prime_partial:A_BomoFB_comp9978_c1_seq2
1002bp
 PREDICTED:_protein_bunched,_class_2/F/G_isoform-like_isoform_X1_[Bombyx_mori]
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0002052 P positive regulation of neuroblast proliferation
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007297 P ovarian follicle cell migration
GO:0007304 P chorion-containing eggshell formation
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008101 P BMP signaling pathway
GO:0008284 P positive regulation of cell population proliferation
GO:0008340 P determination of adult lifespan
GO:0009996 P negative regulation of cell fate specification
GO:0016319 P mushroom body development
GO:0030307 P positive regulation of cell growth
GO:0030707 P ovarian follicle cell development
GO:0035071 P salivary gland cell autophagic cell death
GO:0035282 P segmentation
GO:0042246 P tissue regeneration
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046843 P dorsal appendage formation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
1314 O_BomoFB11183_5prime_partial:A_BomoFB_comp9978_c1_seq4
181bp
 PREDICTED:_putative_mediator_of_RNA_polymerase_II_transcription_subunit_26_isoform_X4_[Bombyx_mori]
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0002052 P positive regulation of neuroblast proliferation
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007297 P ovarian follicle cell migration
GO:0007304 P chorion-containing eggshell formation
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008101 P BMP signaling pathway
GO:0008284 P positive regulation of cell population proliferation
GO:0008340 P determination of adult lifespan
GO:0009996 P negative regulation of cell fate specification
GO:0016319 P mushroom body development
GO:0030154 P cell differentiation
GO:0030307 P positive regulation of cell growth
GO:0030707 P ovarian follicle cell development
GO:0035071 P salivary gland cell autophagic cell death
GO:0035282 P segmentation
GO:0042246 P tissue regeneration
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046843 P dorsal appendage formation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
1315 O_BomoFB11184_5prime_partial:A_BomoFB_comp9979_c0_seq1
287bp
 PREDICTED:_twitchin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001725 C stress fiber
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006936 P muscle contraction
GO:0006939 P smooth muscle contraction
GO:0014820 P tonic smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032060 P bleb assembly
GO:0032154 C cleavage furrow
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051928 P positive regulation of calcium ion transport
GO:0060414 P aorta smooth muscle tissue morphogenesis
GO:0070062 C extracellular exosome
GO:0071476 P cellular hypotonic response
GO:0090303 P positive regulation of wound healing
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1316 O_BomoFB11185_3prime_partial:A_BomoFB_comp9979_c0_seq1
153bp
 hypothetical_protein_ALC53_03163_[Atta_colombica]
1317 O_BomoFB11186_complete:A_BomoFB_comp9981_c0_seq1
172bp
 PREDICTED:_tail-anchored_protein_insertion_receptor_WRB-like_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007507 P heart development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0060041 P retina development in camera-type eye
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
1318 O_BomoFB11187_complete:A_BomoFB_comp9981_c0_seq1
113bp
1319 O_BomoFB11188_internal:A_BomoFB_comp9982_c1_seq1
117bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0005198 F structural molecule activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008289 F lipid binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039526 P modulation by virus of host apoptotic process
GO:0039651 P induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process
GO:0039657 P suppression by virus of host gene expression
GO:0042025 C host cell nucleus
GO:0044174 C host cell endosome
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0055036 C virion membrane
GO:0071897 P DNA biosynthetic process
GO:0072494 C host multivesicular body
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
1320 O_BomoFB11189_5prime_partial:A_BomoFB_comp9982_c1_seq2
165bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
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