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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1261 O_BomoFB11135_complete:A_BomoFB_comp9968_c0_seq2
342bp
 PREDICTED:_aldo-keto_reductase_AKR2E4-like_isoform_X2_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
1262 O_BomoFB11136_complete:A_BomoFB_comp9968_c0_seq2
100bp
 hypothetical_protein_CHLNCDRAFT_33763_[Chlorella_variabilis]
1263 O_BomoFB11137_complete:A_BomoFB_comp9969_c0_seq1
1374bp
 hypothetical_protein_KGM_06719_[Danaus_plexippus]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0007015 P actin filament organization
GO:0007409 P axonogenesis
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1264 O_BomoFB11138_complete:A_BomoFB_comp9969_c0_seq1
168bp
1265 O_BomoFB11139_complete:A_BomoFB_comp9969_c0_seq3
2001bp
 PREDICTED:_protein_sickie_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0007015 P actin filament organization
GO:0007409 P axonogenesis
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1266 O_BomoFB1113_3prime_partial:A_BomoFB_comp2900_c0_seq1
432bp
 PREDICTED:_golgin_subfamily_A_member_4-like_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0045773 P positive regulation of axon extension
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
1267 O_BomoFB11140_complete:A_BomoFB_comp9969_c0_seq3
145bp
1268 O_BomoFB11141_complete:A_BomoFB_comp9969_c0_seq3
107bp
 WYL_domain-containing_protein_[Shewanella_waksmanii]
1269 O_BomoFB11142_complete:A_BomoFB_comp9969_c0_seq4
1938bp
 PREDICTED:_protein_sickie_isoform_X3_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0007015 P actin filament organization
GO:0007409 P axonogenesis
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1270 O_BomoFB11143_complete:A_BomoFB_comp9969_c0_seq4
145bp
1271 O_BomoFB11144_complete:A_BomoFB_comp9969_c0_seq4
107bp
 WYL_domain-containing_protein_[Shewanella_waksmanii]
1272 O_BomoFB11145_complete:A_BomoFB_comp9969_c0_seq5
1938bp
 PREDICTED:_protein_sickie_isoform_X3_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0007015 P actin filament organization
GO:0007409 P axonogenesis
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1273 O_BomoFB11146_complete:A_BomoFB_comp9969_c0_seq5
145bp
1274 O_BomoFB11147_complete:A_BomoFB_comp9969_c0_seq5
107bp
 WYL_domain-containing_protein_[Shewanella_waksmanii]
1275 O_BomoFB11148_complete:A_BomoFB_comp9969_c0_seq6
2001bp
 PREDICTED:_protein_sickie_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0007015 P actin filament organization
GO:0007409 P axonogenesis
GO:0045087 P innate immune response
GO:0050829 P defense response to Gram-negative bacterium
1276 O_BomoFB11149_complete:A_BomoFB_comp9969_c0_seq6
145bp
1277 O_BomoFB1114_complete:A_BomoFB_comp2901_c0_seq1
296bp
 PREDICTED:_uncharacterized_protein_LOC106125909_[Papilio_xuthus]
1278 O_BomoFB11150_complete:A_BomoFB_comp9969_c0_seq6
107bp
 WYL_domain-containing_protein_[Shewanella_waksmanii]
1279 O_BomoFB11151_complete:A_BomoFB_comp9971_c0_seq1
687bp
 PREDICTED:_protein_arginine_N-methyltransferase_5_isoform_X1_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0007088 P regulation of mitotic nuclear division
GO:0008168 F methyltransferase activity
GO:0008283 P cell population proliferation
GO:0008327 F methyl-CpG binding
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019918 P peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0032403 F protein-containing complex binding
GO:0032922 P circadian regulation of gene expression
GO:0034709 C methylosome
GO:0035097 C histone methyltransferase complex
GO:0035243 F protein-arginine omega-N symmetric methyltransferase activity
GO:0035246 P peptidyl-arginine N-methylation
GO:0042118 P endothelial cell activation
GO:0043021 F ribonucleoprotein complex binding
GO:0043234 C protein-containing complex
GO:0043985 P histone H4-R3 methylation
GO:0044020 F histone methyltransferase activity (H4-R3 specific)
GO:0044030 P regulation of DNA methylation
GO:0045596 P negative regulation of cell differentiation
GO:0046982 F protein heterodimerization activity
GO:0048511 P rhythmic process
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0070372 P regulation of ERK1 and ERK2 cascade
GO:0090161 P Golgi ribbon formation
GO:0097421 P liver regeneration
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1903507 P negative regulation of nucleic acid-templated transcription
GO:1904992 P positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway
1280 O_BomoFB11152_complete:A_BomoFB_comp9971_c0_seq1
150bp
 orotidine_5'-phosphate_decarboxylase_[Caldithrix_abyssi]
1281 O_BomoFB11153_complete:A_BomoFB_comp9971_c0_seq2
673bp
 PREDICTED:_protein_arginine_N-methyltransferase_5_isoform_X1_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0007088 P regulation of mitotic nuclear division
GO:0008168 F methyltransferase activity
GO:0008283 P cell population proliferation
GO:0008327 F methyl-CpG binding
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019918 P peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0032403 F protein-containing complex binding
GO:0032922 P circadian regulation of gene expression
GO:0034709 C methylosome
GO:0035097 C histone methyltransferase complex
GO:0035243 F protein-arginine omega-N symmetric methyltransferase activity
GO:0035246 P peptidyl-arginine N-methylation
GO:0042118 P endothelial cell activation
GO:0043021 F ribonucleoprotein complex binding
GO:0043234 C protein-containing complex
GO:0043985 P histone H4-R3 methylation
GO:0044020 F histone methyltransferase activity (H4-R3 specific)
GO:0044030 P regulation of DNA methylation
GO:0045596 P negative regulation of cell differentiation
GO:0046982 F protein heterodimerization activity
GO:0048511 P rhythmic process
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0070372 P regulation of ERK1 and ERK2 cascade
GO:0090161 P Golgi ribbon formation
GO:0097421 P liver regeneration
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1903507 P negative regulation of nucleic acid-templated transcription
GO:1904992 P positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway
1282 O_BomoFB11154_complete:A_BomoFB_comp9971_c0_seq2
150bp
 orotidine_5'-phosphate_decarboxylase_[Caldithrix_abyssi]
1283 O_BomoFB11155_5prime_partial:A_BomoFB_comp9972_c0_seq1
120bp
 P-element_somatic_inhibitor_[Bombyx_mori]
1284 O_BomoFB11156_3prime_partial:A_BomoFB_comp9972_c1_seq1
577bp
 PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
1285 O_BomoFB11157_complete:A_BomoFB_comp9974_c0_seq1
262bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1286 O_BomoFB11158_3prime_partial:A_BomoFB_comp9974_c0_seq2
538bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1287 O_BomoFB11159_complete:A_BomoFB_comp9974_c0_seq3
267bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1288 O_BomoFB1115_complete:A_BomoFB_comp2901_c0_seq1
125bp
1289 O_BomoFB11160_3prime_partial:A_BomoFB_comp9974_c0_seq4
533bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1290 O_BomoFB11161_complete:A_BomoFB_comp9975_c0_seq1
1970bp
 putative_Chromodomain_helicase-DNA-binding_protein_Mi-2-like_protein_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
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