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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
991 O_BomoEE10893_complete:A_BomoEE_comp64571_c0_seq2
107bp
 Uncharacterized_protein_OBRU01_04599_[Operophtera_brumata]
992 O_BomoEE10894_complete:A_BomoEE_comp64571_c0_seq3
349bp
 sob_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0007389 P pattern specification process
GO:0007443 P Malpighian tubule morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
993 O_BomoEE10895_complete:A_BomoEE_comp64571_c0_seq3
184bp
 sob_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
994 O_BomoEE10896_complete:A_BomoEE_comp64574_c0_seq2
822bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
995 O_BomoEE10897_complete:A_BomoEE_comp64574_c0_seq2
185bp
996 O_BomoEE10898_complete:A_BomoEE_comp64574_c0_seq3
909bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
997 O_BomoEE10899_complete:A_BomoEE_comp64574_c0_seq3
185bp
998 O_BomoEE1089_5prime_partial:A_BomoEE_comp24237_c0_seq1
186bp
 PREDICTED:_uncharacterized_protein_LOC106133913_[Amyelois_transitella]
999 O_BomoEE108_3prime_partial:A_BomoEE_comp1970_c0_seq2
100bp
 hypothetical_protein_STCU_01646_[Strigomonas_culicis]
1000 O_BomoEE10900_complete:A_BomoEE_comp64575_c1_seq1
285bp
 PREDICTED:_pleckstrin_homology_domain-containing_family_F_member_2_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030133 C transport vesicle
GO:0031901 C early endosome membrane
GO:0046872 F metal ion binding
1001 O_BomoEE10901_complete:A_BomoEE_comp64575_c1_seq1
143bp
1002 O_BomoEE10902_internal:A_BomoEE_comp64582_c0_seq1
113bp
1003 O_BomoEE10903_internal:A_BomoEE_comp64582_c0_seq1
113bp
 PREDICTED:_uncharacterized_protein_LOC106133203_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0001222 F transcription corepressor binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0035091 F phosphatidylinositol binding
GO:0042393 F histone binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1004 O_BomoEE10904_complete:A_BomoEE_comp64583_c0_seq1
290bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_FKBP65-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0008134 F transcription factor binding
GO:0015031 P protein transport
GO:0016018 F cyclosporin A binding
GO:0016853 F isomerase activity
GO:0019899 F enzyme binding
GO:0030331 F estrogen receptor binding
GO:0030544 F Hsp70 protein binding
GO:0034389 P lipid droplet organization
GO:0042277 F peptide binding
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0051879 F Hsp90 protein binding
GO:0051881 P regulation of mitochondrial membrane potential
GO:0061077 P chaperone-mediated protein folding
GO:0071492 P cellular response to UV-A
1005 O_BomoEE10905_complete:A_BomoEE_comp64583_c0_seq1
150bp
1006 O_BomoEE10906_5prime_partial:A_BomoEE_comp64583_c0_seq2
110bp
 hypothetical_protein_KGM_14190_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0008134 F transcription factor binding
GO:0015031 P protein transport
GO:0016018 F cyclosporin A binding
GO:0016853 F isomerase activity
GO:0019899 F enzyme binding
GO:0030331 F estrogen receptor binding
GO:0030544 F Hsp70 protein binding
GO:0034389 P lipid droplet organization
GO:0042277 F peptide binding
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0051879 F Hsp90 protein binding
GO:0051881 P regulation of mitochondrial membrane potential
GO:0061077 P chaperone-mediated protein folding
GO:0071492 P cellular response to UV-A
1007 O_BomoEE10907_complete:A_BomoEE_comp64584_c0_seq1
169bp
 PREDICTED:_cytochrome_P450_4c3_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1008 O_BomoEE10908_complete:A_BomoEE_comp64584_c0_seq3
116bp
 PREDICTED:_cytochrome_P450_4c3_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1009 O_BomoEE10909_complete:A_BomoEE_comp64584_c0_seq4
220bp
 PREDICTED:_cytochrome_P450_4c3_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1010 O_BomoEE1090_internal:A_BomoEE_comp24263_c0_seq1
114bp
hypothetical_protein_HMPREF9569_01388_[Propionibacterium_acnes_HL078PA1]
1011 O_BomoEE10910_internal:A_BomoEE_comp64587_c0_seq1
194bp
 PREDICTED:_uncharacterized_protein_LOC101742598_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
1012 O_BomoEE10911_internal:A_BomoEE_comp64587_c0_seq2
187bp
 PREDICTED:_uncharacterized_protein_LOC101742598_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
1013 O_BomoEE10912_5prime_partial:A_BomoEE_comp64596_c0_seq1
177bp
 promoting_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008289 F lipid binding
1014 O_BomoEE10913_complete:A_BomoEE_comp64597_c0_seq1
636bp
 PREDICTED:_mitochondrial_sodium/hydrogen_exchanger_9B2_isoform_X1_[Bombyx_mori]
GO:0005451 F monovalent cation:proton antiporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006814 P sodium ion transport
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1902600 P proton transmembrane transport
GO:2001206 P positive regulation of osteoclast development
1015 O_BomoEE10914_complete:A_BomoEE_comp64597_c0_seq1
164bp
1016 O_BomoEE10915_complete:A_BomoEE_comp64597_c0_seq1
137bp
1017 O_BomoEE10916_complete:A_BomoEE_comp64597_c0_seq1
119bp
1018 O_BomoEE10917_complete:A_BomoEE_comp64597_c0_seq1
100bp
1019 O_BomoEE10918_5prime_partial:A_BomoEE_comp64601_c0_seq1
282bp
 PREDICTED:_hexokinase-2-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0003824 F catalytic activity
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0008152 P metabolic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
1020 O_BomoEE10919_complete:A_BomoEE_comp64617_c0_seq1
314bp
 PREDICTED:_INO80_complex_subunit_B_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0031011 C Ino80 complex
GO:0046872 F metal ion binding
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