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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
961 O_BomoEE10866_complete:A_BomoEE_comp64564_c0_seq3
524bp
 PREDICTED:_probable_arginine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004814 F arginine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006420 P arginyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
962 O_BomoEE10867_complete:A_BomoEE_comp64565_c0_seq1
478bp
 PREDICTED:_pantothenate_kinase_3_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
963 O_BomoEE10868_complete:A_BomoEE_comp64565_c0_seq1
112bp
964 O_BomoEE10869_complete:A_BomoEE_comp64565_c0_seq2
466bp
 PREDICTED:_pantothenate_kinase_3_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
965 O_BomoEE1086_complete:A_BomoEE_comp24112_c0_seq2
215bp
 arylalkylamine_N-acetyltransferase_[Bombyx_mori]
GO:0004059 F aralkylamine N-acetyltransferase activity
GO:0004060 F arylamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006584 P catecholamine metabolic process
GO:0008080 F N-acetyltransferase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030187 P melatonin biosynthetic process
GO:0030431 P sleep
GO:0042420 P dopamine catabolic process
GO:0042429 P serotonin catabolic process
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0046334 P octopamine catabolic process
GO:0048066 P developmental pigmentation
966 O_BomoEE10870_complete:A_BomoEE_comp64565_c0_seq2
112bp
967 O_BomoEE10871_complete:A_BomoEE_comp64565_c0_seq3
459bp
 PREDICTED:_pantothenate_kinase_3_isoform_X2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
968 O_BomoEE10872_complete:A_BomoEE_comp64565_c0_seq3
112bp
969 O_BomoEE10873_internal:A_BomoEE_comp64566_c0_seq1
1057bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_neurobeachin-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0016020 C membrane
970 O_BomoEE10874_5prime_partial:A_BomoEE_comp64566_c0_seq1
270bp
971 O_BomoEE10875_complete:A_BomoEE_comp64566_c0_seq1
158bp
972 O_BomoEE10876_complete:A_BomoEE_comp64566_c0_seq1
140bp
973 O_BomoEE10877_5prime_partial:A_BomoEE_comp64566_c0_seq1
131bp
974 O_BomoEE10878_complete:A_BomoEE_comp64566_c0_seq1
121bp
975 O_BomoEE10879_internal:A_BomoEE_comp64566_c0_seq2
2158bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_neurobeachin-like_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008104 P protein localization
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0019901 F protein kinase binding
976 O_BomoEE1087_5prime_partial:A_BomoEE_comp24133_c0_seq2
256bp
 PREDICTED:_serine_protease_easter-like_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
977 O_BomoEE10880_5prime_partial:A_BomoEE_comp64566_c0_seq2
270bp
978 O_BomoEE10881_complete:A_BomoEE_comp64566_c0_seq2
165bp
979 O_BomoEE10882_complete:A_BomoEE_comp64566_c0_seq2
158bp
980 O_BomoEE10883_complete:A_BomoEE_comp64566_c0_seq2
140bp
981 O_BomoEE10884_complete:A_BomoEE_comp64566_c0_seq2
132bp
982 O_BomoEE10885_5prime_partial:A_BomoEE_comp64566_c0_seq2
131bp
983 O_BomoEE10886_complete:A_BomoEE_comp64566_c0_seq2
128bp
984 O_BomoEE10887_complete:A_BomoEE_comp64566_c0_seq2
121bp
985 O_BomoEE10888_complete:A_BomoEE_comp64569_c0_seq1
466bp
 PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
986 O_BomoEE10889_complete:A_BomoEE_comp64569_c0_seq2
466bp
 PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
987 O_BomoEE1088_internal:A_BomoEE_comp24157_c0_seq1
124bp
ribose_ABC_transport_system_[Propionibacterium_acnes_JCM_18916]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015145 F monosaccharide transmembrane transporter activity
GO:0015749 P monosaccharide transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
988 O_BomoEE10890_complete:A_BomoEE_comp64569_c0_seq3
466bp
 PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
989 O_BomoEE10891_complete:A_BomoEE_comp64569_c0_seq4
466bp
 PREDICTED:_DEAD-box_helicase_Dbp80_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
990 O_BomoEE10892_complete:A_BomoEE_comp64571_c0_seq1
473bp
 sob_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007366 P periodic partitioning by pair rule gene
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
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