Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1021	O_BomoEE1091_internal:A_BomoEE_comp24326_c0_seq1 99bp	Bomo_Chr26	hypothetical_protein_RR46_04235_[Papilio_xuthus]
1022	O_BomoEE10920_complete:A_BomoEE_comp64617_c0_seq1 100bp	Bomo_Chr10
1023	O_BomoEE10921_complete:A_BomoEE_comp64617_c0_seq2 314bp	Bomo_Chr10	PREDICTED:_INO80_complex_subunit_B_[Amyelois_transitella]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0008150 P biological_process GO:0031011 C Ino80 complex GO:0046872 F metal ion binding
1024	O_BomoEE10922_complete:A_BomoEE_comp64617_c0_seq2 100bp	Bomo_Chr10
1025	O_BomoEE10923_complete:A_BomoEE_comp64617_c0_seq3 164bp	Bomo_Chr10	PREDICTED:_INO80_complex_subunit_B_[Papilio_xuthus]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0008150 P biological_process GO:0031011 C Ino80 complex GO:0046872 F metal ion binding
1026	O_BomoEE10924_complete:A_BomoEE_comp64617_c0_seq3 139bp	Bomo_Chr10	PREDICTED:_INO80_complex_subunit_B_[Amyelois_transitella]
1027	O_BomoEE10925_complete:A_BomoEE_comp64617_c0_seq4 164bp	Bomo_Chr10	PREDICTED:_INO80_complex_subunit_B_[Papilio_xuthus]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0008150 P biological_process GO:0031011 C Ino80 complex GO:0046872 F metal ion binding
1028	O_BomoEE10926_complete:A_BomoEE_comp64617_c0_seq4 139bp	Bomo_Chr10	PREDICTED:_INO80_complex_subunit_B_[Amyelois_transitella]
1029	O_BomoEE10927_3prime_partial:A_BomoEE_comp64619_c0_seq1 122bp	Bomo_Chr14
1030	O_BomoEE10928_complete:A_BomoEE_comp64619_c1_seq1 121bp	Bomo_Chr24	PREDICTED:_UPF0488_protein_CG14286_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1031	O_BomoEE10929_complete:A_BomoEE_comp64619_c1_seq2 217bp	Bomo_Chr24	UPF0488_protein_[Operophtera_brumata]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1032	O_BomoEE1092_5prime_partial:A_BomoEE_comp24329_c0_seq1 221bp	Bomo_Chr2	PREDICTED:_homeotic_protein_distal-less_isoform_X5_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007275 P multicellular organism development GO:0007449 P proximal/distal pattern formation, imaginal disc GO:0007469 P antennal development GO:0007479 P leg disc proximal/distal pattern formation GO:0007480 P imaginal disc-derived leg morphogenesis GO:0007485 P imaginal disc-derived male genitalia development GO:0007487 P analia development GO:0008587 P imaginal disc-derived wing margin morphogenesis GO:0010092 P specification of animal organ identity GO:0010629 P negative regulation of gene expression GO:0016319 P mushroom body development GO:0021553 P olfactory nerve development GO:0035114 P imaginal disc-derived appendage morphogenesis GO:0035215 P genital disc development GO:0042048 P olfactory behavior GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0048264 P determination of ventral identity GO:0048728 P proboscis development
1033	O_BomoEE10930_complete:A_BomoEE_comp64619_c1_seq3 121bp	Bomo_Chr24	PREDICTED:_UPF0488_protein_CG14286_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1034	O_BomoEE10931_complete:A_BomoEE_comp64619_c1_seq4 121bp	Bomo_Chr24	PREDICTED:_UPF0488_protein_CG14286_[Amyelois_transitella]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1035	O_BomoEE10932_internal:A_BomoEE_comp64627_c0_seq1 157bp	Bomo_Chr8	PREDICTED:_protein_deltex_[Bombyx_mori]	GO:0005112 F Notch binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006897 P endocytosis GO:0007219 P Notch signaling pathway GO:0007220 P Notch receptor processing GO:0008270 F zinc ion binding GO:0008593 P regulation of Notch signaling pathway GO:0016055 P Wnt signaling pathway GO:0016348 P imaginal disc-derived leg joint morphogenesis GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0017124 F SH3 domain binding GO:0035220 P wing disc development GO:0045746 P negative regulation of Notch signaling pathway GO:0045747 P positive regulation of Notch signaling pathway GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
1036	O_BomoEE10933_5prime_partial:A_BomoEE_comp64627_c0_seq1 113bp	Bomo_Chr8
1037	O_BomoEE10934_3prime_partial:A_BomoEE_comp64627_c0_seq1 106bp	Bomo_Chr8
1038	O_BomoEE10935_3prime_partial:A_BomoEE_comp64627_c0_seq2 134bp	Bomo_Chr8	PREDICTED:_protein_deltex_[Bombyx_mori]
1039	O_BomoEE10936_5prime_partial:A_BomoEE_comp64627_c0_seq2 119bp	Bomo_Chr8	PREDICTED:_protein_deltex_[Bombyx_mori]
1040	O_BomoEE10937_internal:A_BomoEE_comp64627_c0_seq3 133bp	Bomo_Chr8
1041	O_BomoEE10938_internal:A_BomoEE_comp64627_c0_seq3 133bp	Bomo_Chr8	PREDICTED:_protein_deltex_[Bombyx_mori]	GO:0005112 F Notch binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006897 P endocytosis GO:0007219 P Notch signaling pathway GO:0007220 P Notch receptor processing GO:0008270 F zinc ion binding GO:0008593 P regulation of Notch signaling pathway GO:0016055 P Wnt signaling pathway GO:0016348 P imaginal disc-derived leg joint morphogenesis GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0017124 F SH3 domain binding GO:0035220 P wing disc development GO:0045746 P negative regulation of Notch signaling pathway GO:0045747 P positive regulation of Notch signaling pathway GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
1042	O_BomoEE10939_complete:A_BomoEE_comp64631_c0_seq1 989bp	Bomo_Chr9	A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]	GO:0004175 F endopeptidase activity GO:0004222 F metalloendopeptidase activity GO:0005515 F protein binding GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005615 C extracellular space GO:0006508 P proteolysis GO:0008201 F heparin binding GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0010573 P vascular endothelial growth factor production GO:0016485 P protein processing GO:0016787 F hydrolase activity GO:0030199 P collagen fibril organization GO:0030574 P collagen catabolic process GO:0031012 C extracellular matrix GO:0032964 P collagen biosynthetic process GO:0043206 P supramolecular fiber organization GO:0046872 F metal ion binding GO:0070062 C extracellular exosome GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
1043	O_BomoEE1093_complete:A_BomoEE_comp24329_c0_seq1 113bp	Bomo_Chr2
1044	O_BomoEE10940_complete:A_BomoEE_comp64631_c0_seq2 1030bp	Bomo_Chr9	A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]	GO:0004175 F endopeptidase activity GO:0004222 F metalloendopeptidase activity GO:0005515 F protein binding GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005615 C extracellular space GO:0006508 P proteolysis GO:0008201 F heparin binding GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0010573 P vascular endothelial growth factor production GO:0016485 P protein processing GO:0016787 F hydrolase activity GO:0030199 P collagen fibril organization GO:0030574 P collagen catabolic process GO:0031012 C extracellular matrix GO:0032964 P collagen biosynthetic process GO:0043206 P supramolecular fiber organization GO:0046872 F metal ion binding GO:0070062 C extracellular exosome GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
1045	O_BomoEE10941_complete:A_BomoEE_comp64633_c0_seq2 362bp	Bomo_Chr17	allatostatin-A_receptor_[Bombyx_mori]	GO:0004871 F obsolete signal transducer activity GO:0004930 F G protein-coupled receptor activity GO:0005886 C plasma membrane GO:0007165 P signal transduction GO:0007186 P G protein-coupled receptor signaling pathway GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042562 F hormone binding GO:0042923 F neuropeptide binding
1046	O_BomoEE10942_complete:A_BomoEE_comp64636_c0_seq1 117bp	Bomo_Chr6	hypothetical_protein_RR46_03775_[Papilio_xuthus]
1047	O_BomoEE10943_5prime_partial:A_BomoEE_comp64636_c0_seq2 104bp	Bomo_Chr6	hypothetical_protein_RR46_03775_[Papilio_xuthus]
1048	O_BomoEE10944_complete:A_BomoEE_comp64646_c0_seq1 736bp	Bomo_Chr15	PREDICTED:_raf_kinase,_effector_of_Ras_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0002168 P instar larval development GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005057 F obsolete signal transducer activity, downstream of receptor GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006468 P protein phosphorylation GO:0007165 P signal transduction GO:0007173 P epidermal growth factor receptor signaling pathway GO:0007283 P spermatogenesis GO:0007298 P border follicle cell migration GO:0007362 P terminal region determination GO:0007369 P gastrulation GO:0007428 P primary branching, open tracheal system GO:0007472 P wing disc morphogenesis GO:0007476 P imaginal disc-derived wing morphogenesis GO:0007552 P metamorphosis GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium GO:0008284 P positive regulation of cell population proliferation GO:0008293 P torso signaling pathway GO:0008586 P imaginal disc-derived wing vein morphogenesis GO:0009267 P cellular response to starvation GO:0016242 P negative regulation of macroautophagy GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0030097 P hemopoiesis GO:0030641 P regulation of cellular pH GO:0035171 P lamellocyte differentiation GO:0035309 P wing and notum subfield formation GO:0035556 P intracellular signal transduction GO:0040014 P regulation of multicellular organism growth GO:0042386 P hemocyte differentiation GO:0046534 P positive regulation of photoreceptor cell differentiation GO:0046579 P positive regulation of Ras protein signal transduction GO:0046777 P protein autophosphorylation GO:0046872 F metal ion binding GO:0051726 P regulation of cell cycle GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:2001234 P negative regulation of apoptotic signaling pathway
1049	O_BomoEE10945_complete:A_BomoEE_comp64646_c0_seq1 206bp	Bomo_Chr15
1050	O_BomoEE10946_complete:A_BomoEE_comp64646_c0_seq1 152bp	Bomo_Chr15