Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9901	O_BomoEE18912_complete:A_BomoEE_comp69575_c0_seq4 108bp	Bomo_Chr10
9902	O_BomoEE18913_complete:A_BomoEE_comp69575_c0_seq4 100bp	Bomo_Chr10	PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Papilio_polytes]	GO:0016226 P iron-sulfur cluster assembly GO:0097361 C CIA complex
9903	O_BomoEE18914_complete:A_BomoEE_comp69575_c0_seq5 272bp	Bomo_Chr10	PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0005739 C mitochondrion GO:0008150 P biological_process
9904	O_BomoEE18915_complete:A_BomoEE_comp69575_c0_seq6 297bp	Bomo_Chr10	PREDICTED:_NIF3-like_protein_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0005739 C mitochondrion GO:0008150 P biological_process
9905	O_BomoEE18916_complete:A_BomoEE_comp69575_c0_seq6 108bp	Bomo_Chr10
9906	O_BomoEE18917_complete:A_BomoEE_comp69575_c0_seq6 100bp	Bomo_Chr10	PREDICTED:_probable_cytosolic_iron-sulfur_protein_assembly_protein_Ciao1_isoform_X1_[Papilio_polytes]	GO:0016226 P iron-sulfur cluster assembly GO:0097361 C CIA complex
9907	O_BomoEE18918_complete:A_BomoEE_comp69576_c1_seq1 435bp	Bomo_Chr3	PREDICTED:_runt-related_transcription_factor_3-like_isoform_X1_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001709 P cell fate determination GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006952 P defense response GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0007469 P antennal development GO:0007486 P imaginal disc-derived female genitalia development GO:0016360 P sensory organ precursor cell fate determination GO:0030097 P hemopoiesis GO:0030154 P cell differentiation GO:0035162 P embryonic hemopoiesis GO:0035163 P embryonic hemocyte differentiation GO:0035165 P embryonic crystal cell differentiation GO:0035168 P larval lymph gland hemocyte differentiation GO:0035170 P lymph gland crystal cell differentiation GO:0035211 P spermathecum morphogenesis GO:0035314 P scab formation GO:0042060 P wound healing GO:0042675 P compound eye cone cell differentiation GO:0042688 P crystal cell differentiation GO:0043565 F sequence-specific DNA binding GO:0044212 F transcription cis-regulatory region binding GO:0045165 P cell fate commitment GO:0045467 P R7 cell development GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046672 P positive regulation of compound eye retinal cell programmed cell death GO:0048477 P oogenesis GO:0048592 P eye morphogenesis GO:0048749 P compound eye development
9908	O_BomoEE18919_complete:A_BomoEE_comp69576_c1_seq1 107bp	Bomo_Chr3	hypothetical_protein_X975_20052,_partial_[Stegodyphus_mimosarum]
9909	O_BomoEE1891_complete:A_BomoEE_comp33033_c0_seq2 109bp	Bomo_Chr23	PREDICTED:_UPF0562_protein_C7orf55_[Amyelois_transitella]	GO:0005739 C mitochondrion
9910	O_BomoEE18920_complete:A_BomoEE_comp69576_c2_seq1 131bp	Bomo_Chr3	hypothetical_protein_RR48_00661_[Papilio_machaon]	GO:0000375 P RNA splicing, via transesterification reactions GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0005634 C nucleus GO:0006397 P mRNA processing GO:0007275 P multicellular organism development GO:0008380 P RNA splicing GO:0048024 P regulation of mRNA splicing, via spliceosome
9911	O_BomoEE18921_complete:A_BomoEE_comp69576_c2_seq1 124bp	Bomo_Chr3
9912	O_BomoEE18922_complete:A_BomoEE_comp69576_c2_seq2 131bp	Bomo_Chr3	hypothetical_protein_RR48_00661_[Papilio_machaon]	GO:0000375 P RNA splicing, via transesterification reactions GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0005634 C nucleus GO:0006397 P mRNA processing GO:0007275 P multicellular organism development GO:0008380 P RNA splicing GO:0048024 P regulation of mRNA splicing, via spliceosome
9913	O_BomoEE18923_complete:A_BomoEE_comp69576_c2_seq2 124bp	Bomo_Chr3
9914	O_BomoEE18924_complete:A_BomoEE_comp69576_c2_seq3 304bp	Bomo_Chr3	PREDICTED:_pre-mRNA-splicing_regulator_female-lethal(2)D_[Amyelois_transitella]	GO:0000375 P RNA splicing, via transesterification reactions GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0005515 F protein binding GO:0005634 C nucleus GO:0006397 P mRNA processing GO:0007275 P multicellular organism development GO:0007530 P sex determination GO:0007539 P primary sex determination, soma GO:0008380 P RNA splicing GO:0019099 P female germ-line sex determination GO:0046331 P lateral inhibition GO:0048024 P regulation of mRNA splicing, via spliceosome GO:0048749 P compound eye development GO:0080009 P mRNA methylation
9915	O_BomoEE18925_complete:A_BomoEE_comp69576_c2_seq3 124bp	Bomo_Chr3
9916	O_BomoEE18926_complete:A_BomoEE_comp69577_c0_seq1 193bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC106135912_[Amyelois_transitella]	GO:0005515 F protein binding GO:0005739 C mitochondrion GO:0005743 C mitochondrial inner membrane GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex GO:0005758 C mitochondrial intermembrane space GO:0006626 P protein targeting to mitochondrion GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0015031 P protein transport GO:0015266 F protein transmembrane transporter activity GO:0015450 F protein-transporting ATPase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030150 P protein import into mitochondrial matrix GO:0031305 C integral component of mitochondrial inner membrane
9917	O_BomoEE18927_complete:A_BomoEE_comp69579_c0_seq1 144bp	Bomo_Chr6	phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0002161 F aminoacyl-tRNA editing activity GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004826 F phenylalanine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006412 P translation GO:0006432 P phenylalanyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0009328 C phenylalanine-tRNA ligase complex GO:0016874 F ligase activity
9918	O_BomoEE18928_complete:A_BomoEE_comp69579_c0_seq2 584bp	Bomo_Chr6	phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0002161 F aminoacyl-tRNA editing activity GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004826 F phenylalanine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006412 P translation GO:0006432 P phenylalanyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0009328 C phenylalanine-tRNA ligase complex GO:0016874 F ligase activity
9919	O_BomoEE18929_5prime_partial:A_BomoEE_comp69579_c0_seq2 136bp	Bomo_Chr6
9920	O_BomoEE1892_complete:A_BomoEE_comp33033_c0_seq2 105bp	Bomo_Chr23
9921	O_BomoEE18930_complete:A_BomoEE_comp69579_c0_seq2 111bp	Bomo_Chr6
9922	O_BomoEE18931_complete:A_BomoEE_comp69579_c0_seq5 443bp	Bomo_Chr6	phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0002161 F aminoacyl-tRNA editing activity GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004826 F phenylalanine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006412 P translation GO:0006432 P phenylalanyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0009328 C phenylalanine-tRNA ligase complex GO:0016874 F ligase activity
9923	O_BomoEE18932_5prime_partial:A_BomoEE_comp69579_c0_seq5 136bp	Bomo_Chr6
9924	O_BomoEE18933_complete:A_BomoEE_comp69579_c0_seq5 111bp	Bomo_Chr6
9925	O_BomoEE18934_complete:A_BomoEE_comp69579_c0_seq6 388bp	Bomo_Chr6	phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0002161 F aminoacyl-tRNA editing activity GO:0003723 F RNA binding GO:0004812 F aminoacyl-tRNA ligase activity GO:0004826 F phenylalanine-tRNA ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006412 P translation GO:0006432 P phenylalanyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0009328 C phenylalanine-tRNA ligase complex GO:0016874 F ligase activity
9926	O_BomoEE18935_5prime_partial:A_BomoEE_comp69579_c0_seq6 136bp	Bomo_Chr6
9927	O_BomoEE18936_complete:A_BomoEE_comp69579_c0_seq6 111bp	Bomo_Chr6
9928	O_BomoEE18937_complete:A_BomoEE_comp69579_c0_seq6 103bp	Bomo_Chr6
9929	O_BomoEE18938_internal:A_BomoEE_comp69580_c0_seq1 102bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC106711526_[Papilio_machaon]
9930	O_BomoEE18939_complete:A_BomoEE_comp69583_c0_seq2 160bp	Bomo_Chr12	PREDICTED:_aldehyde_dehydrogenase_X,_mitochondrial-like_[Bombyx_mori]	GO:0004029 F aldehyde dehydrogenase (NAD+) activity GO:0005654 C nucleoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005975 P carbohydrate metabolic process GO:0006068 P ethanol catabolic process GO:0006069 P ethanol oxidation GO:0008152 P metabolic process GO:0016491 F oxidoreductase activity GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor GO:0043231 C intracellular membrane-bounded organelle GO:0055114 P obsolete oxidation-reduction process