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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9931 O_BomoEE1893_complete:A_BomoEE_comp33036_c0_seq1
1030bp
 PREDICTED:_apoptosis-stimulating_of_p53_protein_1_[Bombyx_mori]
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0045786 P negative regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097193 P intrinsic apoptotic signaling pathway
9932 O_BomoEE18940_complete:A_BomoEE_comp69583_c0_seq3
160bp
 PREDICTED:_aldehyde_dehydrogenase_X,_mitochondrial-like_[Bombyx_mori]
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006068 P ethanol catabolic process
GO:0006069 P ethanol oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0043231 C intracellular membrane-bounded organelle
GO:0055114 P obsolete oxidation-reduction process
9933 O_BomoEE18941_internal:A_BomoEE_comp69585_c0_seq1
99bp
hypothetical_protein_[Streptococcus_pneumoniae]
9934 O_BomoEE18942_internal:A_BomoEE_comp69586_c0_seq1
445bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9935 O_BomoEE18943_5prime_partial:A_BomoEE_comp69586_c0_seq2
332bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9936 O_BomoEE18944_3prime_partial:A_BomoEE_comp69586_c0_seq2
210bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9937 O_BomoEE18945_5prime_partial:A_BomoEE_comp69586_c0_seq3
292bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9938 O_BomoEE18946_3prime_partial:A_BomoEE_comp69586_c0_seq3
149bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9939 O_BomoEE18947_internal:A_BomoEE_comp69586_c0_seq4
462bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9940 O_BomoEE18948_internal:A_BomoEE_comp69586_c0_seq5
413bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9941 O_BomoEE18949_5prime_partial:A_BomoEE_comp69586_c0_seq5
108bp
9942 O_BomoEE1894_complete:A_BomoEE_comp33036_c0_seq1
123bp
9943 O_BomoEE18950_5prime_partial:A_BomoEE_comp69586_c0_seq5
101bp
9944 O_BomoEE18951_internal:A_BomoEE_comp69586_c0_seq6
396bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9945 O_BomoEE18952_5prime_partial:A_BomoEE_comp69586_c0_seq6
118bp
9946 O_BomoEE18953_5prime_partial:A_BomoEE_comp69586_c0_seq7
332bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9947 O_BomoEE18954_3prime_partial:A_BomoEE_comp69586_c0_seq7
161bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9948 O_BomoEE18955_5prime_partial:A_BomoEE_comp69586_c0_seq7
118bp
9949 O_BomoEE18956_5prime_partial:A_BomoEE_comp69586_c0_seq8
189bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9950 O_BomoEE18957_5prime_partial:A_BomoEE_comp69586_c0_seq9
292bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D,_partial_[Amyelois_transitella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9951 O_BomoEE18958_5prime_partial:A_BomoEE_comp69586_c0_seq9
108bp
9952 O_BomoEE18959_5prime_partial:A_BomoEE_comp69586_c0_seq9
101bp
9953 O_BomoEE1895_complete:A_BomoEE_comp33038_c0_seq1
762bp
 PREDICTED:_NHL_repeat-containing_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
9954 O_BomoEE18960_3prime_partial:A_BomoEE_comp69586_c0_seq9
100bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
9955 O_BomoEE18961_complete:A_BomoEE_comp69587_c0_seq1
432bp
 PREDICTED:_DNA_ligase_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0043504 P mitochondrial DNA repair
GO:0045910 P negative regulation of DNA recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070421 C DNA ligase III-XRCC1 complex
GO:0071897 P DNA biosynthetic process
GO:0090298 P negative regulation of mitochondrial DNA replication
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
9956 O_BomoEE18962_complete:A_BomoEE_comp69587_c0_seq2
538bp
 PREDICTED:_DNA_ligase_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0043504 P mitochondrial DNA repair
GO:0045910 P negative regulation of DNA recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070421 C DNA ligase III-XRCC1 complex
GO:0071897 P DNA biosynthetic process
GO:0090298 P negative regulation of mitochondrial DNA replication
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
9957 O_BomoEE18963_complete:A_BomoEE_comp69587_c0_seq3
999bp
 DNA_ligase_3_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0033151 P V(D)J recombination
GO:0043504 P mitochondrial DNA repair
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070421 C DNA ligase III-XRCC1 complex
GO:0071897 P DNA biosynthetic process
GO:0090298 P negative regulation of mitochondrial DNA replication
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
9958 O_BomoEE18964_3prime_partial:A_BomoEE_comp69594_c0_seq2
436bp
 PREDICTED:_uncharacterized_protein_LOC101736680_[Bombyx_mori]
GO:0005634 C nucleus
GO:0030261 P chromosome condensation
GO:0051276 P chromosome organization
9959 O_BomoEE18965_5prime_partial:A_BomoEE_comp69594_c0_seq2
210bp
9960 O_BomoEE18966_complete:A_BomoEE_comp69594_c0_seq2
159bp
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