SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9451 O_BomoEE18507_5prime_partial:A_BomoEE_comp69418_c0_seq1
100bp
9452 O_BomoEE18508_3prime_partial:A_BomoEE_comp69421_c0_seq2
192bp
 PREDICTED:_uncharacterized_protein_LOC101743520_[Bombyx_mori]
9453 O_BomoEE18509_5prime_partial:A_BomoEE_comp69421_c0_seq2
130bp
9454 O_BomoEE1850_5prime_partial:A_BomoEE_comp32872_c0_seq2
169bp
9455 O_BomoEE18510_3prime_partial:A_BomoEE_comp69421_c0_seq3
224bp
 PREDICTED:_uncharacterized_protein_LOC101743520_[Bombyx_mori]
9456 O_BomoEE18511_5prime_partial:A_BomoEE_comp69421_c0_seq3
130bp
9457 O_BomoEE18512_complete:A_BomoEE_comp69421_c0_seq4
131bp
 PREDICTED:_uncharacterized_protein_LOC101743520_[Bombyx_mori]
9458 O_BomoEE18513_5prime_partial:A_BomoEE_comp69421_c0_seq5
106bp
9459 O_BomoEE18514_complete:A_BomoEE_comp69422_c0_seq1
198bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9460 O_BomoEE18515_3prime_partial:A_BomoEE_comp69422_c0_seq1
171bp
9461 O_BomoEE18516_complete:A_BomoEE_comp69422_c0_seq1
136bp
9462 O_BomoEE18517_complete:A_BomoEE_comp69422_c0_seq2
201bp
9463 O_BomoEE18518_complete:A_BomoEE_comp69422_c0_seq2
186bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9464 O_BomoEE18519_3prime_partial:A_BomoEE_comp69422_c0_seq3
687bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9465 O_BomoEE1851_complete:A_BomoEE_comp32891_c0_seq1
1368bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0035191 P nuclear axial expansion
GO:0043035 F chromatin insulator sequence binding
GO:0046872 F metal ion binding
GO:0051493 P regulation of cytoskeleton organization
GO:0090202 P obsolete gene looping
9466 O_BomoEE18520_complete:A_BomoEE_comp69422_c0_seq3
283bp
9467 O_BomoEE18521_complete:A_BomoEE_comp69422_c0_seq3
136bp
9468 O_BomoEE18522_complete:A_BomoEE_comp69422_c0_seq4
209bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9469 O_BomoEE18523_complete:A_BomoEE_comp69422_c0_seq4
173bp
9470 O_BomoEE18524_complete:A_BomoEE_comp69422_c0_seq4
136bp
9471 O_BomoEE18525_complete:A_BomoEE_comp69422_c0_seq5
201bp
9472 O_BomoEE18526_complete:A_BomoEE_comp69422_c0_seq5
175bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9473 O_BomoEE18527_3prime_partial:A_BomoEE_comp69422_c0_seq6
338bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_isoform_X2_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9474 O_BomoEE18528_3prime_partial:A_BomoEE_comp69422_c0_seq6
277bp
9475 O_BomoEE18529_complete:A_BomoEE_comp69422_c0_seq6
136bp
9476 O_BomoEE1852_complete:A_BomoEE_comp32900_c0_seq1
205bp
 PREDICTED:_protein_MIS12_homolog_[Amyelois_transitella]
9477 O_BomoEE18530_complete:A_BomoEE_comp69422_c0_seq7
524bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9478 O_BomoEE18531_complete:A_BomoEE_comp69422_c0_seq7
201bp
9479 O_BomoEE18532_complete:A_BomoEE_comp69422_c0_seq8
547bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9480 O_BomoEE18533_complete:A_BomoEE_comp69422_c0_seq8
177bp
previous next from show/95730

- SilkBase 1999-2023 -