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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9481 O_BomoEE18534_complete:A_BomoEE_comp69422_c0_seq8
136bp
9482 O_BomoEE18535_3prime_partial:A_BomoEE_comp69422_c0_seq9
349bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_isoform_X2_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9483 O_BomoEE18536_complete:A_BomoEE_comp69422_c0_seq9
279bp
9484 O_BomoEE18537_complete:A_BomoEE_comp69422_c0_seq9
136bp
9485 O_BomoEE18538_3prime_partial:A_BomoEE_comp69422_c0_seq10
322bp
 PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030335 P positive regulation of cell migration
GO:0030838 P positive regulation of actin filament polymerization
GO:0031252 C cell leading edge
GO:0031529 P ruffle organization
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0042995 C cell projection
GO:0044351 P macropinocytosis
GO:0044354 C macropinosome
GO:0046415 P urate metabolic process
GO:0051496 P positive regulation of stress fiber assembly
GO:0051638 P barbed-end actin filament uncapping
GO:0051639 P actin filament network formation
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1902745 P positive regulation of lamellipodium organization
GO:2000813 P negative regulation of barbed-end actin filament capping
9486 O_BomoEE18539_5prime_partial:A_BomoEE_comp69424_c0_seq1
109bp
9487 O_BomoEE1853_complete:A_BomoEE_comp32915_c0_seq1
225bp
 B-cell_receptor-associated_protein_31_[Papilio_xuthus]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006915 P apoptotic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
9488 O_BomoEE18540_complete:A_BomoEE_comp69425_c0_seq1
403bp
 PREDICTED:_lysine-specific_demethylase_8_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
9489 O_BomoEE18541_complete:A_BomoEE_comp69425_c0_seq1
148bp
 isovaleryl_coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0008152 P metabolic process
GO:0008470 F isovaleryl-CoA dehydrogenase activity
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 C mitochondrial membrane
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0051260 P protein homooligomerization
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
9490 O_BomoEE18542_complete:A_BomoEE_comp69425_c0_seq1
102bp
9491 O_BomoEE18543_complete:A_BomoEE_comp69425_c0_seq2
403bp
 PREDICTED:_lysine-specific_demethylase_8_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
9492 O_BomoEE18544_complete:A_BomoEE_comp69425_c0_seq3
417bp
 isovaleryl_coenzyme_A_dehydrogenase_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0008152 P metabolic process
GO:0008470 F isovaleryl-CoA dehydrogenase activity
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 C mitochondrial membrane
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0051260 P protein homooligomerization
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
9493 O_BomoEE18545_complete:A_BomoEE_comp69425_c0_seq3
403bp
 PREDICTED:_lysine-specific_demethylase_8_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
9494 O_BomoEE18546_complete:A_BomoEE_comp69425_c0_seq3
139bp
9495 O_BomoEE18547_complete:A_BomoEE_comp69431_c0_seq1
256bp
 PREDICTED:_acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
9496 O_BomoEE18548_complete:A_BomoEE_comp69431_c0_seq1
232bp
 PREDICTED:_acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008168 F methyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
9497 O_BomoEE18549_5prime_partial:A_BomoEE_comp69431_c0_seq1
110bp
9498 O_BomoEE1854_complete:A_BomoEE_comp32918_c0_seq1
397bp
 PREDICTED:_proteasomal_ATPase-associated_factor_1-like_isoform_X2_[Plutella_xylostella]
GO:0000502 C proteasome complex
9499 O_BomoEE18550_complete:A_BomoEE_comp69431_c0_seq2
256bp
 PREDICTED:_acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0005737 C cytoplasm
GO:0008289 F lipid binding
9500 O_BomoEE18551_5prime_partial:A_BomoEE_comp69431_c0_seq2
110bp
9501 O_BomoEE18552_complete:A_BomoEE_comp69432_c0_seq2
253bp
 PREDICTED:_phosphatidate_phosphatase_PPAPDC1B_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0008195 F phosphatidate phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0046839 P phospholipid dephosphorylation
9502 O_BomoEE18553_complete:A_BomoEE_comp69432_c0_seq2
127bp
9503 O_BomoEE18554_complete:A_BomoEE_comp69432_c0_seq2
126bp
9504 O_BomoEE18555_complete:A_BomoEE_comp69432_c0_seq4
253bp
 PREDICTED:_phosphatidate_phosphatase_PPAPDC1B_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0008195 F phosphatidate phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0046839 P phospholipid dephosphorylation
9505 O_BomoEE18556_complete:A_BomoEE_comp69432_c0_seq4
127bp
9506 O_BomoEE18557_complete:A_BomoEE_comp69432_c0_seq4
126bp
9507 O_BomoEE18558_complete:A_BomoEE_comp69432_c0_seq5
253bp
 PREDICTED:_phosphatidate_phosphatase_PPAPDC1B_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0008195 F phosphatidate phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0046839 P phospholipid dephosphorylation
9508 O_BomoEE18559_complete:A_BomoEE_comp69432_c0_seq5
127bp
9509 O_BomoEE1855_complete:A_BomoEE_comp32925_c0_seq1
337bp
 casein_kinase_I_alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016055 P Wnt signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0045095 C keratin filament
GO:0045104 P intermediate filament cytoskeleton organization
GO:0051301 P cell division
9510 O_BomoEE18560_complete:A_BomoEE_comp69432_c0_seq5
126bp
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