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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9421 O_BomoEE18480_complete:A_BomoEE_comp69402_c0_seq1
106bp
9422 O_BomoEE18481_complete:A_BomoEE_comp69402_c0_seq2
418bp
 PREDICTED:_protein_NDRG3-like_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0070062 C extracellular exosome
9423 O_BomoEE18482_complete:A_BomoEE_comp69402_c0_seq2
131bp
 hypothetical_protein_ALC53_07882,_partial_[Atta_colombica]
9424 O_BomoEE18483_complete:A_BomoEE_comp69409_c0_seq1
424bp
 PREDICTED:_flotillin-1_isoform_X1_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016600 C flotillin complex
9425 O_BomoEE18484_complete:A_BomoEE_comp69409_c0_seq1
163bp
9426 O_BomoEE18485_complete:A_BomoEE_comp69409_c0_seq3
446bp
 PREDICTED:_flotillin-1_isoform_X1_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016600 C flotillin complex
9427 O_BomoEE18486_complete:A_BomoEE_comp69409_c0_seq3
196bp
9428 O_BomoEE18487_complete:A_BomoEE_comp69409_c0_seq4
427bp
 PREDICTED:_flotillin-1_isoform_X1_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016600 C flotillin complex
9429 O_BomoEE18488_complete:A_BomoEE_comp69409_c0_seq4
163bp
9430 O_BomoEE18489_complete:A_BomoEE_comp69409_c0_seq5
446bp
 PREDICTED:_flotillin-1_isoform_X1_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016600 C flotillin complex
9431 O_BomoEE1848_complete:A_BomoEE_comp32872_c0_seq1
149bp
 PREDICTED:_cactin-like_isoform_X3_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0009950 P dorsal/ventral axis specification
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
GO:0048812 P neuron projection morphogenesis
GO:0071013 C catalytic step 2 spliceosome
9432 O_BomoEE18490_complete:A_BomoEE_comp69409_c0_seq5
196bp
9433 O_BomoEE18491_internal:A_BomoEE_comp69411_c0_seq1
747bp
 PREDICTED:_fibrillin-1-like_[Bombyx_mori]
GO:0001527 C microfibril
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0009653 P anatomical structure morphogenesis
GO:0090287 P regulation of cellular response to growth factor stimulus
9434 O_BomoEE18492_complete:A_BomoEE_comp69411_c0_seq1
203bp
9435 O_BomoEE18493_3prime_partial:A_BomoEE_comp69411_c0_seq1
131bp
9436 O_BomoEE18494_5prime_partial:A_BomoEE_comp69411_c0_seq1
107bp
9437 O_BomoEE18495_internal:A_BomoEE_comp69411_c0_seq2
513bp
 PREDICTED:_fibrillin-1-like_[Bombyx_mori]
GO:0001527 C microfibril
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0022617 P extracellular matrix disassembly
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0030198 P extracellular matrix organization
GO:0030326 P embryonic limb morphogenesis
GO:0030501 P positive regulation of bone mineralization
GO:0031012 C extracellular matrix
GO:0035108 P limb morphogenesis
GO:0035583 P sequestering of TGFbeta in extracellular matrix
GO:0043010 P camera-type eye development
GO:0045669 P positive regulation of osteoblast differentiation
GO:0048048 P embryonic eye morphogenesis
GO:0060346 P bone trabecula formation
GO:0090287 P regulation of cellular response to growth factor stimulus
9438 O_BomoEE18496_5prime_partial:A_BomoEE_comp69411_c0_seq2
139bp
9439 O_BomoEE18497_3prime_partial:A_BomoEE_comp69411_c0_seq2
131bp
9440 O_BomoEE18498_complete:A_BomoEE_comp69412_c0_seq4
120bp
9441 O_BomoEE18499_complete:A_BomoEE_comp69412_c1_seq2
106bp
 PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
9442 O_BomoEE1849_3prime_partial:A_BomoEE_comp32872_c0_seq2
438bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cactin_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0009950 P dorsal/ventral axis specification
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
GO:0048812 P neuron projection morphogenesis
GO:0071013 C catalytic step 2 spliceosome
9443 O_BomoEE184_internal:A_BomoEE_comp2910_c0_seq1
114bp
 PREDICTED:_filamin-A-like_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0007067 P mitotic cell cycle
GO:0007301 P female germline ring canal formation
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008104 P protein localization
GO:0008302 P female germline ring canal formation, actin assembly
GO:0008340 P determination of adult lifespan
GO:0008355 P olfactory learning
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030725 P germline ring canal formation
GO:0035182 C female germline ring canal outer rim
GO:0035183 C female germline ring canal inner rim
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035324 C female germline ring canal
GO:0045179 C apical cortex
GO:0048149 P behavioral response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051495 P positive regulation of cytoskeleton organization
GO:0070938 C contractile ring
9444 O_BomoEE18500_internal:A_BomoEE_comp69414_c1_seq1
163bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9445 O_BomoEE18501_3prime_partial:A_BomoEE_comp69414_c1_seq2
123bp
 PREDICTED:_uncharacterized_protein_LOC105841419_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9446 O_BomoEE18502_3prime_partial:A_BomoEE_comp69414_c1_seq3
123bp
 PREDICTED:_uncharacterized_protein_LOC105841419_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9447 O_BomoEE18503_complete:A_BomoEE_comp69416_c2_seq1
185bp
 PREDICTED:_uncharacterized_protein_LOC101744598_isoform_X3_[Bombyx_mori]
9448 O_BomoEE18504_3prime_partial:A_BomoEE_comp69416_c2_seq1
132bp
9449 O_BomoEE18505_complete:A_BomoEE_comp69416_c2_seq2
274bp
 PREDICTED:_uncharacterized_protein_LOC101744598_isoform_X2_[Bombyx_mori]
9450 O_BomoEE18506_3prime_partial:A_BomoEE_comp69416_c2_seq2
132bp
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