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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8431 O_BomoEE1758_complete:A_BomoEE_comp32655_c0_seq1
186bp
8432 O_BomoEE17590_internal:A_BomoEE_comp69029_c0_seq5
141bp
 PREDICTED:_protein_TERMINAL_FLOWER_1-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008429 F phosphatidylethanolamine binding
GO:0009908 P flower development
GO:0009909 P regulation of flower development
GO:0010229 P inflorescence development
GO:0030154 P cell differentiation
GO:0048510 P regulation of timing of transition from vegetative to reproductive phase
GO:0048572 P short-day photoperiodism
GO:0048573 P photoperiodism, flowering
GO:0048575 P short-day photoperiodism, flowering
8433 O_BomoEE17591_5prime_partial:A_BomoEE_comp69037_c1_seq1
133bp
8434 O_BomoEE17592_5prime_partial:A_BomoEE_comp69037_c1_seq1
127bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0008101 P BMP signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040008 P regulation of growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0048619 P embryonic hindgut morphogenesis
8435 O_BomoEE17593_5prime_partial:A_BomoEE_comp69037_c1_seq1
114bp
8436 O_BomoEE17594_complete:A_BomoEE_comp69039_c0_seq1
117bp
8437 O_BomoEE17595_complete:A_BomoEE_comp69039_c0_seq2
117bp
8438 O_BomoEE17596_complete:A_BomoEE_comp69040_c0_seq1
355bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8439 O_BomoEE17597_complete:A_BomoEE_comp69040_c0_seq2
136bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8440 O_BomoEE17598_3prime_partial:A_BomoEE_comp69040_c0_seq3
151bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8441 O_BomoEE17599_3prime_partial:A_BomoEE_comp69040_c0_seq4
370bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8442 O_BomoEE1759_complete:A_BomoEE_comp32655_c0_seq1
163bp
8443 O_BomoEE175_3prime_partial:A_BomoEE_comp2825_c0_seq2
302bp
 PREDICTED:_bumetanide-sensitive_sodium-(potassium)-chloride_cotransporter-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006821 P chloride transport
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1902476 P chloride transmembrane transport
8444 O_BomoEE17600_complete:A_BomoEE_comp69040_c0_seq5
134bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8445 O_BomoEE17601_complete:A_BomoEE_comp69040_c0_seq6
353bp
 PREDICTED:_cyclin-G-associated_kinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005925 C focal adhesion
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030054 C cell junction
GO:0030332 F cyclin binding
GO:0048471 C perinuclear region of cytoplasm
8446 O_BomoEE17602_internal:A_BomoEE_comp69043_c0_seq1
384bp
 PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8447 O_BomoEE17603_5prime_partial:A_BomoEE_comp69043_c0_seq1
267bp
8448 O_BomoEE17604_5prime_partial:A_BomoEE_comp69043_c0_seq1
132bp
8449 O_BomoEE17605_3prime_partial:A_BomoEE_comp69043_c0_seq1
124bp
8450 O_BomoEE17606_5prime_partial:A_BomoEE_comp69043_c0_seq1
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8451 O_BomoEE17607_5prime_partial:A_BomoEE_comp69043_c0_seq2
267bp
8452 O_BomoEE17608_3prime_partial:A_BomoEE_comp69043_c0_seq2
231bp
 PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8453 O_BomoEE17609_5prime_partial:A_BomoEE_comp69043_c0_seq2
149bp
8454 O_BomoEE1760_complete:A_BomoEE_comp32655_c0_seq1
130bp
8455 O_BomoEE17610_5prime_partial:A_BomoEE_comp69043_c0_seq2
125bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8456 O_BomoEE17611_3prime_partial:A_BomoEE_comp69043_c0_seq2
115bp
8457 O_BomoEE17612_5prime_partial:A_BomoEE_comp69043_c0_seq2
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8458 O_BomoEE17613_5prime_partial:A_BomoEE_comp69043_c0_seq3
267bp
8459 O_BomoEE17614_3prime_partial:A_BomoEE_comp69043_c0_seq3
231bp
 PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8460 O_BomoEE17615_5prime_partial:A_BomoEE_comp69043_c0_seq3
122bp
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