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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8461 O_BomoEE17616_5prime_partial:A_BomoEE_comp69043_c0_seq3
120bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8462 O_BomoEE17617_5prime_partial:A_BomoEE_comp69043_c0_seq3
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8463 O_BomoEE17618_3prime_partial:A_BomoEE_comp69043_c0_seq3
110bp
8464 O_BomoEE17619_5prime_partial:A_BomoEE_comp69043_c0_seq4
267bp
8465 O_BomoEE1761_5prime_partial:A_BomoEE_comp32655_c0_seq1
101bp
8466 O_BomoEE17620_3prime_partial:A_BomoEE_comp69043_c0_seq4
231bp
 PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8467 O_BomoEE17621_5prime_partial:A_BomoEE_comp69043_c0_seq4
118bp
8468 O_BomoEE17622_5prime_partial:A_BomoEE_comp69043_c0_seq4
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8469 O_BomoEE17623_5prime_partial:A_BomoEE_comp69043_c0_seq4
107bp
 PREDICTED:_branchpoint-bridging_protein_[Plutella_xylostella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8470 O_BomoEE17624_3prime_partial:A_BomoEE_comp69043_c0_seq5
309bp
 PREDICTED:_branchpoint-bridging_protein-like,_partial_[Amyelois_transitella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8471 O_BomoEE17625_5prime_partial:A_BomoEE_comp69043_c0_seq5
267bp
8472 O_BomoEE17626_5prime_partial:A_BomoEE_comp69043_c0_seq5
149bp
8473 O_BomoEE17627_5prime_partial:A_BomoEE_comp69043_c0_seq5
125bp
 PREDICTED:_splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8474 O_BomoEE17628_3prime_partial:A_BomoEE_comp69043_c0_seq5
115bp
8475 O_BomoEE17629_5prime_partial:A_BomoEE_comp69043_c0_seq5
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8476 O_BomoEE1762_3prime_partial:A_BomoEE_comp32656_c0_seq1
357bp
 PREDICTED:_myosin-7B_isoform_X2_[Papilio_xuthus]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008298 P intracellular mRNA localization
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017137 F small GTPase binding
GO:0019233 P sensory perception of pain
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0032050 F clathrin heavy chain binding
GO:0045502 F dynein complex binding
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
GO:0070727 P cellular macromolecule localization
GO:2000302 P positive regulation of synaptic vesicle exocytosis
GO:2000370 P positive regulation of clathrin-dependent endocytosis
8477 O_BomoEE17630_complete:A_BomoEE_comp69048_c0_seq1
234bp
 AAEL000367-PA_[Aedes_aegypti]
8478 O_BomoEE17631_complete:A_BomoEE_comp69048_c0_seq1
124bp
 PREDICTED:_fidgetin-like_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0008568 F microtubule-severing ATPase activity
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0031122 P cytoplasmic microtubule organization
GO:0046034 P ATP metabolic process
GO:0046872 F metal ion binding
8479 O_BomoEE17632_complete:A_BomoEE_comp69048_c0_seq2
325bp
 AAEL000367-PA_[Aedes_aegypti]
8480 O_BomoEE17633_complete:A_BomoEE_comp69048_c0_seq2
285bp
 PREDICTED:_fidgetin-like_protein_1_[Amyelois_transitella]
8481 O_BomoEE17634_complete:A_BomoEE_comp69048_c0_seq2
195bp
 PREDICTED:_fidgetin-like_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016787 F hydrolase activity
GO:0046034 P ATP metabolic process
GO:0046872 F metal ion binding
8482 O_BomoEE17635_complete:A_BomoEE_comp69048_c0_seq3
223bp
 AAEL000367-PA_[Aedes_aegypti]
8483 O_BomoEE17636_complete:A_BomoEE_comp69048_c0_seq4
504bp
 PREDICTED:_fidgetin-like_protein_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0001649 P osteoblast differentiation
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008568 F microtubule-severing ATPase activity
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016787 F hydrolase activity
GO:0031122 P cytoplasmic microtubule organization
GO:0033687 P osteoblast proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0046034 P ATP metabolic process
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0070062 C extracellular exosome
GO:0071479 P cellular response to ionizing radiation
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
8484 O_BomoEE17637_complete:A_BomoEE_comp69048_c0_seq4
247bp
 AAEL000367-PA_[Aedes_aegypti]
8485 O_BomoEE17638_complete:A_BomoEE_comp69048_c0_seq5
325bp
 AAEL000367-PA_[Aedes_aegypti]
8486 O_BomoEE17639_complete:A_BomoEE_comp69048_c0_seq5
195bp
 PREDICTED:_fidgetin-like_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0016787 F hydrolase activity
GO:0046034 P ATP metabolic process
GO:0046872 F metal ion binding
8487 O_BomoEE1763_complete:A_BomoEE_comp32656_c0_seq1
145bp
8488 O_BomoEE17640_complete:A_BomoEE_comp69048_c0_seq6
285bp
 PREDICTED:_fidgetin-like_protein_1_[Amyelois_transitella]
8489 O_BomoEE17641_complete:A_BomoEE_comp69048_c0_seq6
223bp
 AAEL000367-PA_[Aedes_aegypti]
8490 O_BomoEE17642_complete:A_BomoEE_comp69048_c0_seq7
164bp
 AAEL000367-PA_[Aedes_aegypti]
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