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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4141 O_BomoEE13728_5prime_partial:A_BomoEE_comp67244_c0_seq2
204bp
 PREDICTED:_putative_acyl-activating_enzyme_19_[Plutella_xylostella]
4142 O_BomoEE13729_3prime_partial:A_BomoEE_comp67244_c0_seq2
109bp
4143 O_BomoEE1372_complete:A_BomoEE_comp29843_c0_seq2
288bp
 PREDICTED:_zinc_finger_protein_568_isoform_X4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4144 O_BomoEE13730_complete:A_BomoEE_comp67245_c0_seq1
135bp
 single-stranded_DNA-binding_protein_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
4145 O_BomoEE13731_complete:A_BomoEE_comp67245_c0_seq2
379bp
 PREDICTED:_single-stranded_DNA-binding_protein_3_isoform_X1_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006461 P protein-containing complex assembly
GO:0008284 P positive regulation of cell population proliferation
GO:0021501 P prechordal plate formation
GO:0021547 P midbrain-hindbrain boundary initiation
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060322 P head development
GO:0060323 P head morphogenesis
GO:2000744 P positive regulation of anterior head development
4146 O_BomoEE13732_3prime_partial:A_BomoEE_comp67246_c0_seq1
195bp
 PREDICTED:_uncharacterized_protein_LOC101735819_isoform_X2_[Bombyx_mori]
4147 O_BomoEE13733_3prime_partial:A_BomoEE_comp67246_c0_seq2
200bp
 PREDICTED:_uncharacterized_protein_LOC101735819_isoform_X2_[Bombyx_mori]
4148 O_BomoEE13734_3prime_partial:A_BomoEE_comp67249_c0_seq1
519bp
 PREDICTED:_bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0005634 C nucleus
GO:0006261 P DNA-dependent DNA replication
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0008623 C CHRAC
GO:0046872 F metal ion binding
4149 O_BomoEE13735_complete:A_BomoEE_comp67249_c0_seq1
111bp
4150 O_BomoEE13736_5prime_partial:A_BomoEE_comp67249_c0_seq1
106bp
4151 O_BomoEE13737_complete:A_BomoEE_comp67253_c0_seq1
117bp
 PREDICTED:_RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
4152 O_BomoEE13738_complete:A_BomoEE_comp67253_c0_seq2
202bp
 PREDICTED:_uncharacterized_protein_LOC101738197_isoform_X3_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
4153 O_BomoEE13739_complete:A_BomoEE_comp67253_c0_seq2
157bp
 PREDICTED:_RCC1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000209 P protein polyubiquitination
GO:0002376 P immune system process
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016874 F ligase activity
GO:0032020 P ISG15-protein conjugation
GO:0032480 P negative regulation of type I interferon production
GO:0042296 F ISG15 transferase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0050688 P regulation of defense response to virus
GO:0051607 P defense response to virus
4154 O_BomoEE1373_complete:A_BomoEE_comp29843_c0_seq2
203bp
4155 O_BomoEE13740_complete:A_BomoEE_comp67253_c0_seq3
352bp
 RCC1_domain-containing_protein_1_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008150 P biological_process
4156 O_BomoEE13741_5prime_partial:A_BomoEE_comp67254_c0_seq1
912bp
 PREDICTED:_fibril-forming_collagen_alpha_chain-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
4157 O_BomoEE13742_complete:A_BomoEE_comp67254_c0_seq2
352bp
 PREDICTED:_fibril-forming_collagen_alpha_chain-like_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
4158 O_BomoEE13743_complete:A_BomoEE_comp67257_c0_seq1
555bp
 PREDICTED:_vang-like_protein_1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016328 C lateral plasma membrane
4159 O_BomoEE13744_complete:A_BomoEE_comp67257_c0_seq1
133bp
4160 O_BomoEE13745_complete:A_BomoEE_comp67257_c0_seq2
466bp
 PREDICTED:_vang-like_protein_1_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016328 C lateral plasma membrane
4161 O_BomoEE13746_complete:A_BomoEE_comp67257_c0_seq2
130bp
 PREDICTED:_vang-like_protein_2_[Plutella_xylostella]
GO:0001725 C stress fiber
GO:0001736 P establishment of planar polarity
GO:0001843 P neural tube closure
GO:0001942 P hair follicle development
GO:0001947 P heart looping
GO:0003149 P membranous septum morphogenesis
GO:0003150 P muscular septum morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007266 P Rho protein signal transduction
GO:0007275 P multicellular organism development
GO:0008150 P biological_process
GO:0009952 P anterior/posterior pattern specification
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0022007 P convergent extension involved in neural plate elongation
GO:0030111 P regulation of Wnt signaling pathway
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0032835 P glomerulus development
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035019 P somatic stem cell population maintenance
GO:0035058 P non-motile cilium assembly
GO:0035567 P non-canonical Wnt signaling pathway
GO:0035787 P cell migration involved in kidney development
GO:0036342 P post-anal tail morphogenesis
GO:0036514 P dopaminergic neuron axon guidance
GO:0036515 P serotonergic neuron axon guidance
GO:0042060 P wound healing
GO:0043507 P positive regulation of JUN kinase activity
GO:0045176 P apical protein localization
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0048103 P somatic stem cell division
GO:0048105 P establishment of body hair planar orientation
GO:0048546 P digestive tract morphogenesis
GO:0060028 P convergent extension involved in axis elongation
GO:0060029 P convergent extension involved in organogenesis
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0060119 P inner ear receptor cell development
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060187 C cell pole
GO:0060488 P orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis
GO:0060489 P planar dichotomous subdivision of terminal units involved in lung branching morphogenesis
GO:0060490 P lateral sprouting involved in lung morphogenesis
GO:0060993 P kidney morphogenesis
GO:0061346 P planar cell polarity pathway involved in heart morphogenesis
GO:0071944 C cell periphery
GO:0090102 P cochlea development
GO:0090103 P cochlea morphogenesis
GO:0090175 P regulation of establishment of planar polarity
GO:0090177 P establishment of planar polarity involved in neural tube closure
GO:0090179 P planar cell polarity pathway involved in neural tube closure
4162 O_BomoEE13747_5prime_partial:A_BomoEE_comp67259_c0_seq1
123bp
4163 O_BomoEE13748_complete:A_BomoEE_comp67259_c0_seq1
107bp
4164 O_BomoEE13749_3prime_partial:A_BomoEE_comp67260_c0_seq1
586bp
 PREDICTED:_uncharacterized_protein_LOC105842927,_partial_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032983 C kainate selective glutamate receptor complex
GO:0035255 F ionotropic glutamate receptor binding
GO:0045202 C synapse
GO:2000312 P regulation of kainate selective glutamate receptor activity
4165 O_BomoEE1374_complete:A_BomoEE_comp29855_c0_seq1
336bp
 putative_fatty_acyl_reductase_FAR5,_partial_[Spodoptera_litura]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
4166 O_BomoEE13750_complete:A_BomoEE_comp67260_c0_seq1
107bp
4167 O_BomoEE13751_3prime_partial:A_BomoEE_comp67260_c0_seq2
431bp
 PREDICTED:_uncharacterized_protein_LOC105842927,_partial_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032983 C kainate selective glutamate receptor complex
GO:0035255 F ionotropic glutamate receptor binding
GO:0045202 C synapse
GO:2000312 P regulation of kainate selective glutamate receptor activity
4168 O_BomoEE13752_complete:A_BomoEE_comp67260_c0_seq2
107bp
4169 O_BomoEE13753_5prime_partial:A_BomoEE_comp67260_c0_seq3
124bp
4170 O_BomoEE13754_5prime_partial:A_BomoEE_comp67275_c0_seq1
236bp
 PREDICTED:_uncharacterized_protein_LOC105841762_[Bombyx_mori]
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