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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4171 O_BomoEE13755_3prime_partial:A_BomoEE_comp67275_c0_seq1
123bp
 reverse_transcriptase_[Bombyx_mori]
4172 O_BomoEE13756_complete:A_BomoEE_comp67276_c0_seq1
808bp
 PREDICTED:_protein_lines_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007367 P segment polarity determination
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0008293 P torso signaling pathway
GO:0008544 P epidermis development
GO:0009880 P embryonic pattern specification
GO:0009946 P proximal/distal axis specification
GO:0016055 P Wnt signaling pathway
GO:0035220 P wing disc development
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048617 P embryonic foregut morphogenesis
GO:0048619 P embryonic hindgut morphogenesis
4173 O_BomoEE13757_complete:A_BomoEE_comp67276_c0_seq1
141bp
4174 O_BomoEE13758_3prime_partial:A_BomoEE_comp67277_c0_seq2
559bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_A-kinase_anchor_protein_13_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0002376 P immune system process
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005923 C bicellular tight junction
GO:0007015 P actin filament organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0016023 C cytoplasmic vesicle
GO:0017048 F small GTPase binding
GO:0030054 C cell junction
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031410 C cytoplasmic vesicle
GO:0031982 C vesicle
GO:0032587 C ruffle membrane
GO:0032755 P positive regulation of interleukin-6 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0045087 P innate immune response
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048365 F small GTPase binding
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051301 P cell division
GO:0071225 P cellular response to muramyl dipeptide
4175 O_BomoEE13759_complete:A_BomoEE_comp67277_c0_seq2
132bp
 Actin-interacting_protein_1_[Papilio_machaon]
4176 O_BomoEE1375_complete:A_BomoEE_comp29855_c0_seq2
238bp
 putative_fatty_acyl_reductase_FAR5,_partial_[Spodoptera_litura]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
4177 O_BomoEE13760_5prime_partial:A_BomoEE_comp67277_c0_seq2
124bp
4178 O_BomoEE13761_3prime_partial:A_BomoEE_comp67279_c0_seq1
596bp
 PREDICTED:_phagocyte_signaling-impaired_protein_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005764 C lysosome
GO:0006911 P phagocytosis, engulfment
GO:0006955 P immune response
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0031416 C NatB complex
GO:0045087 P innate immune response
4179 O_BomoEE13762_3prime_partial:A_BomoEE_comp67279_c0_seq2
590bp
 PREDICTED:_phagocyte_signaling-impaired_protein_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0003674 F molecular_function
GO:0005764 C lysosome
GO:0006911 P phagocytosis, engulfment
GO:0006955 P immune response
GO:0045087 P innate immune response
4180 O_BomoEE13763_complete:A_BomoEE_comp67281_c0_seq1
250bp
 putative_uroporphyrinogen-III_synthase-like_protein_[Danaus_plexippus]
GO:0004852 F uroporphyrinogen-III synthase activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006780 P uroporphyrinogen III biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016829 F lyase activity
GO:0033014 P tetrapyrrole biosynthetic process
GO:0046677 P response to antibiotic
GO:0048037 F obsolete cofactor binding
GO:0071243 P cellular response to arsenic-containing substance
GO:0071418 P cellular response to amine stimulus
4181 O_BomoEE13764_complete:A_BomoEE_comp67281_c0_seq1
101bp
4182 O_BomoEE13765_complete:A_BomoEE_comp67286_c0_seq1
447bp
 PREDICTED:_serine/threonine_kinase_LKB1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0001558 P regulation of cell growth
GO:0001894 P tissue homeostasis
GO:0001944 P vasculature development
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007409 P axonogenesis
GO:0008285 P negative regulation of cell population proliferation
GO:0010212 P response to ionizing radiation
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030010 P establishment of cell polarity
GO:0030111 P regulation of Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030275 F LRR domain binding
GO:0030295 F protein kinase activator activity
GO:0030308 P negative regulation of cell growth
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0032147 P activation of protein kinase activity
GO:0036398 C TCR signalosome
GO:0036399 P TCR signalosome assembly
GO:0042593 P glucose homeostasis
GO:0043276 P anoikis
GO:0045059 P positive thymic T cell selection
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048814 P regulation of dendrite morphogenesis
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050772 P positive regulation of axonogenesis
GO:0050852 P T cell receptor signaling pathway
GO:0051055 P negative regulation of lipid biosynthetic process
GO:0051645 P Golgi localization
GO:0051896 P regulation of protein kinase B signaling
GO:0060070 P canonical Wnt signaling pathway
GO:0060770 P negative regulation of epithelial cell proliferation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071493 P cellular response to UV-B
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097484 P dendrite extension
GO:1900182 P positive regulation of protein localization to nucleus
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1904262 P negative regulation of TORC1 signaling
4183 O_BomoEE13766_5prime_partial:A_BomoEE_comp67287_c0_seq1
384bp
 PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X1_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
4184 O_BomoEE13767_complete:A_BomoEE_comp67287_c0_seq1
130bp
4185 O_BomoEE13768_5prime_partial:A_BomoEE_comp67287_c0_seq1
113bp
4186 O_BomoEE13769_3prime_partial:A_BomoEE_comp67290_c0_seq1
365bp
 PREDICTED:_uncharacterized_protein_LOC101742357_[Bombyx_mori]
4187 O_BomoEE1376_5prime_partial:A_BomoEE_comp29862_c0_seq1
717bp
 PREDICTED:_uncharacterized_protein_LOC101738890_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4188 O_BomoEE13770_complete:A_BomoEE_comp67290_c0_seq1
224bp
4189 O_BomoEE13771_3prime_partial:A_BomoEE_comp67290_c0_seq2
328bp
 PREDICTED:_uncharacterized_protein_LOC101742357_[Bombyx_mori]
4190 O_BomoEE13772_complete:A_BomoEE_comp67290_c0_seq2
224bp
4191 O_BomoEE13773_3prime_partial:A_BomoEE_comp67292_c0_seq1
3189bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
4192 O_BomoEE13774_complete:A_BomoEE_comp67292_c0_seq1
206bp
4193 O_BomoEE13775_complete:A_BomoEE_comp67292_c0_seq1
186bp
4194 O_BomoEE13776_complete:A_BomoEE_comp67292_c0_seq1
126bp
4195 O_BomoEE13777_complete:A_BomoEE_comp67292_c0_seq1
123bp
4196 O_BomoEE13778_complete:A_BomoEE_comp67292_c0_seq1
104bp
4197 O_BomoEE13779_3prime_partial:A_BomoEE_comp67292_c0_seq2
3189bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
4198 O_BomoEE1377_5prime_partial:A_BomoEE_comp29871_c0_seq1
206bp
 heat_shock_protein_1_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
4199 O_BomoEE13780_complete:A_BomoEE_comp67292_c0_seq2
206bp
4200 O_BomoEE13781_complete:A_BomoEE_comp67292_c0_seq2
186bp
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