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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
301 O_BomoEE10271_complete:A_BomoEE_comp64061_c0_seq2
544bp
 PREDICTED:_elongation_factor_Tu_GTP-binding_domain-containing_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
302 O_BomoEE10272_complete:A_BomoEE_comp64061_c0_seq2
186bp
303 O_BomoEE10273_complete:A_BomoEE_comp64064_c0_seq1
335bp
 ap_endonuclease_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
304 O_BomoEE10274_complete:A_BomoEE_comp64064_c0_seq1
180bp
305 O_BomoEE10275_complete:A_BomoEE_comp64064_c0_seq2
633bp
 ap_endonuclease_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
306 O_BomoEE10276_complete:A_BomoEE_comp64064_c0_seq2
293bp
307 O_BomoEE10277_complete:A_BomoEE_comp64064_c0_seq2
104bp
308 O_BomoEE10278_complete:A_BomoEE_comp64067_c0_seq1
139bp
 PREDICTED:_MAGUK_p55_subfamily_member_5_isoform_X1_[Amyelois_transitella]
309 O_BomoEE10279_complete:A_BomoEE_comp64067_c0_seq2
314bp
 PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]
310 O_BomoEE1027_internal:A_BomoEE_comp22767_c0_seq1
116bp
 voltage-dependent_cation_channel_SC1_[Bombyx_mori]
GO:0001518 C voltage-gated sodium channel complex
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0022843 F voltage-gated cation channel activity
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042048 P olfactory behavior
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0086010 P membrane depolarization during action potential
311 O_BomoEE10280_complete:A_BomoEE_comp64067_c0_seq2
164bp
312 O_BomoEE10281_complete:A_BomoEE_comp64067_c0_seq2
154bp
313 O_BomoEE10282_3prime_partial:A_BomoEE_comp64067_c0_seq3
426bp
 PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007009 P plasma membrane organization
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0032287 P peripheral nervous system myelin maintenance
GO:0032288 P myelin assembly
GO:0035749 C myelin sheath adaxonal region
GO:0035750 P protein localization to myelin sheath abaxonal region
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043234 C protein-containing complex
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
GO:0070830 P bicellular tight junction assembly
GO:0090002 P protein localization to plasma membrane
GO:0090162 P establishment of epithelial cell polarity
314 O_BomoEE10283_5prime_partial:A_BomoEE_comp64067_c0_seq3
108bp
315 O_BomoEE10284_3prime_partial:A_BomoEE_comp64067_c0_seq4
601bp
 PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007009 P plasma membrane organization
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019904 F protein domain specific binding
GO:0030054 C cell junction
GO:0032287 P peripheral nervous system myelin maintenance
GO:0032288 P myelin assembly
GO:0035749 C myelin sheath adaxonal region
GO:0035750 P protein localization to myelin sheath abaxonal region
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043234 C protein-containing complex
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
GO:0070830 P bicellular tight junction assembly
GO:0090002 P protein localization to plasma membrane
GO:0090162 P establishment of epithelial cell polarity
316 O_BomoEE10285_complete:A_BomoEE_comp64067_c0_seq4
164bp
317 O_BomoEE10286_complete:A_BomoEE_comp64067_c0_seq4
154bp
318 O_BomoEE10287_5prime_partial:A_BomoEE_comp64067_c0_seq4
108bp
319 O_BomoEE10288_complete:A_BomoEE_comp64071_c0_seq1
419bp
 PREDICTED:_uncharacterized_protein_LOC101740840_[Bombyx_mori]
320 O_BomoEE10289_complete:A_BomoEE_comp64071_c0_seq1
136bp
321 O_BomoEE1028_internal:A_BomoEE_comp22768_c0_seq2
132bp
 PREDICTED:_gamma-aminobutyric_acid_type_B_receptor_subunit_2_[Bombyx_mori]
322 O_BomoEE10290_complete:A_BomoEE_comp64071_c0_seq2
419bp
 PREDICTED:_uncharacterized_protein_LOC101740840_[Bombyx_mori]
323 O_BomoEE10291_complete:A_BomoEE_comp64071_c0_seq2
136bp
324 O_BomoEE10292_complete:A_BomoEE_comp64074_c0_seq2
145bp
325 O_BomoEE10293_internal:A_BomoEE_comp64081_c0_seq1
104bp
326 O_BomoEE10294_3prime_partial:A_BomoEE_comp64082_c0_seq1
103bp
 PREDICTED:_uncharacterized_protein_LOC101742479_[Bombyx_mori]
327 O_BomoEE10295_complete:A_BomoEE_comp64082_c0_seq2
717bp
 PREDICTED:_protein_PTCD3_homolog,_mitochondrial_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006417 P regulation of translation
GO:0008150 P biological_process
GO:0019843 F rRNA binding
GO:0032543 P mitochondrial translation
GO:0043024 F ribosomal small subunit binding
328 O_BomoEE10296_complete:A_BomoEE_comp64082_c0_seq2
496bp
 PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_41-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
329 O_BomoEE10297_complete:A_BomoEE_comp64082_c0_seq2
230bp
330 O_BomoEE10298_complete:A_BomoEE_comp64082_c0_seq2
129bp
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