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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
271 O_BomoEE10244_complete:A_BomoEE_comp64048_c0_seq1
220bp
 PREDICTED:_synaptobrevin_isoform_X1_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006897 P endocytosis
GO:0006906 P vesicle fusion
GO:0006911 P phagocytosis, engulfment
GO:0008333 P endosome to lysosome transport
GO:0009986 C cell surface
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0017156 P calcium-ion regulated exocytosis
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030133 C transport vesicle
GO:0030141 C secretory granule
GO:0030658 C transport vesicle membrane
GO:0030667 C secretory granule membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031091 C platelet alpha granule
GO:0031143 C pseudopodium
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0035493 P SNARE complex assembly
GO:0035577 C azurophil granule membrane
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0043308 P eosinophil degranulation
GO:0043312 P neutrophil degranulation
GO:0043320 P natural killer cell degranulation
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0070062 C extracellular exosome
GO:1900483 P regulation of protein targeting to vacuolar membrane
GO:1903595 P positive regulation of histamine secretion by mast cell
272 O_BomoEE10245_complete:A_BomoEE_comp64050_c0_seq1
214bp
 GTP-binding_nuclear_protein_Ran_[Bombyx_mori]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000132 P establishment of mitotic spindle orientation
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005880 C nuclear microtubule
GO:0005938 C cell cortex
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007346 P regulation of mitotic cell cycle
GO:0008152 P metabolic process
GO:0008360 P regulation of cell shape
GO:0009267 P cellular response to starvation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032880 P regulation of protein localization
GO:0048812 P neuron projection morphogenesis
GO:0051301 P cell division
GO:0072686 C mitotic spindle
273 O_BomoEE10246_complete:A_BomoEE_comp64051_c0_seq1
1002bp
 PREDICTED:_collagen_alpha-1(XVIII)_chain-like_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001568 P blood vessel development
GO:0005201 F extracellular matrix structural constituent
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005584 C collagen type I trimer
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0008217 P regulation of blood pressure
GO:0030199 P collagen fibril organization
GO:0030674 F protein-macromolecule adaptor activity
GO:0031012 C extracellular matrix
GO:0042802 F identical protein binding
GO:0043589 P skin morphogenesis
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048407 F platelet-derived growth factor binding
GO:0070062 C extracellular exosome
GO:0070208 P protein heterotrimerization
GO:0071230 P cellular response to amino acid stimulus
274 O_BomoEE10247_complete:A_BomoEE_comp64052_c0_seq1
972bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_18_homolog_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007634 P optokinetic behavior
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0015721 P bile acid and bile salt transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030674 F protein-macromolecule adaptor activity
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0035542 P regulation of SNARE complex assembly
GO:0043485 P endosome to pigment granule transport
GO:0045176 P apical protein localization
GO:0046872 F metal ion binding
GO:0048069 P eye pigmentation
GO:0048757 P pigment granule maturation
GO:0060036 P notochord cell vacuolation
275 O_BomoEE10248_complete:A_BomoEE_comp64052_c0_seq1
218bp
276 O_BomoEE10249_complete:A_BomoEE_comp64052_c0_seq2
193bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_18_homolog_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007634 P optokinetic behavior
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0015721 P bile acid and bile salt transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030674 F protein-macromolecule adaptor activity
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0035542 P regulation of SNARE complex assembly
GO:0043485 P endosome to pigment granule transport
GO:0045176 P apical protein localization
GO:0046872 F metal ion binding
GO:0048069 P eye pigmentation
GO:0048757 P pigment granule maturation
GO:0060036 P notochord cell vacuolation
277 O_BomoEE1024_internal:A_BomoEE_comp22727_c0_seq1
213bp
MULTISPECIES:_alanine_racemase_[Propionibacterium]
278 O_BomoEE10250_complete:A_BomoEE_comp64053_c0_seq1
218bp
 PREDICTED:_protein_Fer3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009790 P embryo development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0030154 P cell differentiation
GO:0030902 P hindbrain development
GO:0031016 P pancreas development
GO:0031017 P exocrine pancreas development
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048384 P retinoic acid receptor signaling pathway
GO:0048699 P generation of neurons
279 O_BomoEE10251_complete:A_BomoEE_comp64053_c0_seq2
186bp
 PREDICTED:_protein_Fer3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009790 P embryo development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0030154 P cell differentiation
GO:0030902 P hindbrain development
GO:0031016 P pancreas development
GO:0031017 P exocrine pancreas development
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0048384 P retinoic acid receptor signaling pathway
GO:0048699 P generation of neurons
280 O_BomoEE10252_complete:A_BomoEE_comp64056_c0_seq1
291bp
 probable_chitinase_3_precursor_[Papilio_xuthus]
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
281 O_BomoEE10253_5prime_partial:A_BomoEE_comp64056_c0_seq2
137bp
 PREDICTED:_probable_chitinase_3_[Papilio_machaon]
282 O_BomoEE10254_complete:A_BomoEE_comp64056_c1_seq1
582bp
 nimrod_B_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
283 O_BomoEE10255_complete:A_BomoEE_comp64056_c1_seq2
187bp
 nimrod_B_precursor_[Bombyx_mori]
284 O_BomoEE10256_complete:A_BomoEE_comp64057_c0_seq1
580bp
 PREDICTED:_tyrosine-protein_kinase_CSK_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001817 P regulation of cytokine production
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0019903 F protein phosphatase binding
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032715 P negative regulation of interleukin-6 production
GO:0033673 P negative regulation of kinase activity
GO:0034236 F protein kinase A catalytic subunit binding
GO:0034332 P adherens junction organization
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042802 F identical protein binding
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0043406 P positive regulation of MAP kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045779 P negative regulation of bone resorption
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048709 P oligodendrocyte differentiation
GO:0050765 P negative regulation of phagocytosis
GO:0050863 P regulation of T cell activation
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071375 P cellular response to peptide hormone stimulus
285 O_BomoEE10257_complete:A_BomoEE_comp64057_c0_seq1
180bp
286 O_BomoEE10258_complete:A_BomoEE_comp64057_c0_seq1
145bp
287 O_BomoEE10259_complete:A_BomoEE_comp64057_c0_seq2
580bp
 PREDICTED:_tyrosine-protein_kinase_CSK_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001817 P regulation of cytokine production
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0019903 F protein phosphatase binding
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032715 P negative regulation of interleukin-6 production
GO:0033673 P negative regulation of kinase activity
GO:0034236 F protein kinase A catalytic subunit binding
GO:0034332 P adherens junction organization
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042802 F identical protein binding
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0043406 P positive regulation of MAP kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045779 P negative regulation of bone resorption
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048709 P oligodendrocyte differentiation
GO:0050765 P negative regulation of phagocytosis
GO:0050863 P regulation of T cell activation
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071375 P cellular response to peptide hormone stimulus
288 O_BomoEE1025_5prime_partial:A_BomoEE_comp22739_c0_seq1
121bp
integrase/recombinase-like_protein_[Geobacillus_virus_E3]
GO:0003677 F DNA binding
GO:0006310 P DNA recombination
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0015074 P DNA integration
GO:0046718 P viral entry into host cell
GO:0051301 P cell division
GO:0075713 P establishment of integrated proviral latency
289 O_BomoEE10260_complete:A_BomoEE_comp64057_c0_seq2
180bp
290 O_BomoEE10261_complete:A_BomoEE_comp64057_c0_seq2
145bp
291 O_BomoEE10262_complete:A_BomoEE_comp64057_c0_seq3
588bp
 PREDICTED:_tyrosine-protein_kinase_CSK_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001817 P regulation of cytokine production
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0010989 P negative regulation of low-density lipoprotein particle clearance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0019903 F protein phosphatase binding
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032715 P negative regulation of interleukin-6 production
GO:0033673 P negative regulation of kinase activity
GO:0034236 F protein kinase A catalytic subunit binding
GO:0034332 P adherens junction organization
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042802 F identical protein binding
GO:0042997 P negative regulation of Golgi to plasma membrane protein transport
GO:0043406 P positive regulation of MAP kinase activity
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045779 P negative regulation of bone resorption
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048709 P oligodendrocyte differentiation
GO:0050765 P negative regulation of phagocytosis
GO:0050863 P regulation of T cell activation
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0070062 C extracellular exosome
GO:0070064 F proline-rich region binding
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0071375 P cellular response to peptide hormone stimulus
292 O_BomoEE10263_3prime_partial:A_BomoEE_comp64057_c0_seq3
165bp
293 O_BomoEE10264_5prime_partial:A_BomoEE_comp64057_c0_seq3
101bp
294 O_BomoEE10265_complete:A_BomoEE_comp64060_c0_seq1
107bp
 PREDICTED:_asparagine_synthetase_domain-containing_protein_CG17486_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
295 O_BomoEE10266_complete:A_BomoEE_comp64060_c0_seq2
570bp
 PREDICTED:_asparagine_synthetase_domain-containing_protein_CG17486_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
296 O_BomoEE10267_complete:A_BomoEE_comp64060_c0_seq3
321bp
 PREDICTED:_asparagine_synthetase_domain-containing_protein_CG17486_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
297 O_BomoEE10268_complete:A_BomoEE_comp64061_c0_seq1
1063bp
 PREDICTED:_elongation_factor_Tu_GTP-binding_domain-containing_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
298 O_BomoEE10269_complete:A_BomoEE_comp64061_c0_seq1
213bp
299 O_BomoEE1026_complete:A_BomoEE_comp22746_c0_seq1
163bp
300 O_BomoEE10270_complete:A_BomoEE_comp64061_c0_seq1
162bp
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