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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1501 O_BomoEE11351_complete:A_BomoEE_comp65005_c0_seq6
178bp
 PREDICTED:_uncharacterized_protein_LOC107449455_[Parasteatoda_tepidariorum]
1502 O_BomoEE11352_complete:A_BomoEE_comp65005_c0_seq7
546bp
 PREDICTED:_zinc_finger_protein_260_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
1503 O_BomoEE11353_complete:A_BomoEE_comp65005_c0_seq8
664bp
 PREDICTED:_zinc_finger_protein_271-like_isoform_X1_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1504 O_BomoEE11354_complete:A_BomoEE_comp65005_c0_seq8
157bp
1505 O_BomoEE11355_complete:A_BomoEE_comp65005_c0_seq9
364bp
 PREDICTED:_zinc_finger_protein_62_homolog_isoform_X2_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1506 O_BomoEE11356_complete:A_BomoEE_comp65005_c0_seq10
533bp
 PREDICTED:_zinc_finger_protein_93_isoform_X5_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1507 O_BomoEE11357_complete:A_BomoEE_comp65005_c0_seq10
119bp
1508 O_BomoEE11358_complete:A_BomoEE_comp65007_c0_seq1
451bp
 putative_zinc_finger_protein_nocA_[Danaus_plexippus]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0008056 P ocellus development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
1509 O_BomoEE11359_complete:A_BomoEE_comp65007_c0_seq1
110bp
1510 O_BomoEE1135_5prime_partial:A_BomoEE_comp25259_c0_seq1
239bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
1511 O_BomoEE11360_complete:A_BomoEE_comp65007_c0_seq1
107bp
1512 O_BomoEE11361_internal:A_BomoEE_comp65012_c0_seq1
107bp
 gag-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
1513 O_BomoEE11362_internal:A_BomoEE_comp65012_c0_seq1
106bp
1514 O_BomoEE11363_complete:A_BomoEE_comp65019_c1_seq2
101bp
 PREDICTED:_glycogen_synthase_kinase-3_beta_isoform_X4_[Bombyx_mori]
1515 O_BomoEE11364_complete:A_BomoEE_comp65022_c0_seq1
448bp
 PREDICTED:_pre-mRNA-splicing_factor_CWC25_homolog_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
1516 O_BomoEE11365_complete:A_BomoEE_comp65022_c0_seq1
145bp
1517 O_BomoEE11366_complete:A_BomoEE_comp65022_c0_seq1
118bp
1518 O_BomoEE11367_complete:A_BomoEE_comp65024_c0_seq1
599bp
 PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
1519 O_BomoEE11368_complete:A_BomoEE_comp65024_c0_seq1
347bp
 PREDICTED:_lanC-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
1520 O_BomoEE11369_complete:A_BomoEE_comp65024_c0_seq1
113bp
1521 O_BomoEE1136_5prime_partial:A_BomoEE_comp25259_c0_seq2
194bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
1522 O_BomoEE11370_complete:A_BomoEE_comp65024_c0_seq2
599bp
 PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
1523 O_BomoEE11371_complete:A_BomoEE_comp65024_c0_seq2
264bp
 PREDICTED:_lanC-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
1524 O_BomoEE11372_complete:A_BomoEE_comp65024_c0_seq2
113bp
1525 O_BomoEE11373_complete:A_BomoEE_comp65024_c0_seq2
101bp
 PREDICTED:_lanC-like_protein_1_[Amyelois_transitella]
1526 O_BomoEE11374_complete:A_BomoEE_comp65024_c0_seq3
599bp
 PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
1527 O_BomoEE11375_complete:A_BomoEE_comp65024_c0_seq3
407bp
 PREDICTED:_lanC-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0070062 C extracellular exosome
1528 O_BomoEE11376_complete:A_BomoEE_comp65024_c0_seq3
113bp
1529 O_BomoEE11377_complete:A_BomoEE_comp65024_c0_seq4
599bp
 PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
1530 O_BomoEE11378_complete:A_BomoEE_comp65024_c0_seq4
264bp
 PREDICTED:_lanC-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
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