SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/95730
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1531 O_BomoEE11379_complete:A_BomoEE_comp65024_c0_seq4
113bp
1532 O_BomoEE1137_internal:A_BomoEE_comp25263_c0_seq1
185bp
 putative_axonemal_dynein_intermediate_chain_inner_arm_i1_[Operophtera_brumata]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003674 F molecular_function
GO:0005575 C cellular_component
1533 O_BomoEE11380_complete:A_BomoEE_comp65024_c0_seq4
104bp
 PREDICTED:_lanC-like_protein_1_[Amyelois_transitella]
1534 O_BomoEE11381_internal:A_BomoEE_comp65032_c0_seq1
102bp
 PREDICTED:_uncharacterized_protein_LOC106718269_[Papilio_machaon]
1535 O_BomoEE11382_complete:A_BomoEE_comp65033_c0_seq1
246bp
 DID_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
1536 O_BomoEE11383_complete:A_BomoEE_comp65033_c0_seq2
246bp
 DID_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
1537 O_BomoEE11384_complete:A_BomoEE_comp65033_c0_seq3
258bp
 DID_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
1538 O_BomoEE11385_complete:A_BomoEE_comp65034_c0_seq1
376bp
 PREDICTED:_proline-rich_protein_PRCC-like_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
1539 O_BomoEE11386_complete:A_BomoEE_comp65034_c0_seq1
192bp
 PREDICTED:_28S_ribosomal_protein_S11,_mitochondrial_[Papilio_machaon]
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0048027 F mRNA 5'-UTR binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
GO:0070181 F small ribosomal subunit rRNA binding
1540 O_BomoEE11387_complete:A_BomoEE_comp65034_c0_seq1
125bp
1541 O_BomoEE11388_complete:A_BomoEE_comp65034_c0_seq2
107bp
1542 O_BomoEE11389_complete:A_BomoEE_comp65034_c0_seq3
376bp
 PREDICTED:_proline-rich_protein_PRCC-like_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
1543 O_BomoEE1138_internal:A_BomoEE_comp25341_c1_seq1
104bp
1544 O_BomoEE11390_complete:A_BomoEE_comp65034_c0_seq3
125bp
1545 O_BomoEE11391_complete:A_BomoEE_comp65035_c0_seq2
113bp
1546 O_BomoEE11392_5prime_partial:A_BomoEE_comp65035_c0_seq4
150bp
 Fibroblast_growth_factor_receptor_4,_partial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
1547 O_BomoEE11393_5prime_partial:A_BomoEE_comp65035_c0_seq5
235bp
 PREDICTED:_fibroblast_growth_factor_receptor-like,_partial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007507 P heart development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0071603 P endothelial cell-cell adhesion
1548 O_BomoEE11394_3prime_partial:A_BomoEE_comp65045_c0_seq1
327bp
 PREDICTED:_uncharacterized_protein_LOC101739897_[Bombyx_mori]
1549 O_BomoEE11395_5prime_partial:A_BomoEE_comp65047_c0_seq1
249bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
1550 O_BomoEE11396_3prime_partial:A_BomoEE_comp65047_c0_seq1
158bp
1551 O_BomoEE11397_5prime_partial:A_BomoEE_comp65047_c0_seq2
294bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
1552 O_BomoEE11398_3prime_partial:A_BomoEE_comp65047_c0_seq2
213bp
1553 O_BomoEE11399_complete:A_BomoEE_comp65047_c0_seq2
133bp
1554 O_BomoEE1139_internal:A_BomoEE_comp25341_c1_seq1
104bp
dehydrogenase_[Caldimonas_manganoxidans]
GO:0004174 F electron-transferring-flavoprotein dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
1555 O_BomoEE113_5prime_partial:A_BomoEE_comp2049_c0_seq1
162bp
1556 O_BomoEE11400_5prime_partial:A_BomoEE_comp65047_c0_seq3
249bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
1557 O_BomoEE11401_3prime_partial:A_BomoEE_comp65047_c0_seq3
158bp
1558 O_BomoEE11402_5prime_partial:A_BomoEE_comp65047_c0_seq4
320bp
 PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
1559 O_BomoEE11403_3prime_partial:A_BomoEE_comp65047_c0_seq4
213bp
1560 O_BomoEE11404_5prime_partial:A_BomoEE_comp65048_c0_seq1
104bp
previous next from show/95730

- SilkBase 1999-2023 -