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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1471 O_BomoEE11324_5prime_partial:A_BomoEE_comp64985_c0_seq1
218bp
1472 O_BomoEE11325_complete:A_BomoEE_comp64985_c0_seq1
187bp
1473 O_BomoEE11326_complete:A_BomoEE_comp64985_c0_seq1
118bp
1474 O_BomoEE11327_complete:A_BomoEE_comp64985_c0_seq1
112bp
1475 O_BomoEE11328_3prime_partial:A_BomoEE_comp64985_c0_seq2
583bp
 growth_arrest-specific_protein_2_[Bombyx_mori]
GO:0001578 P microtubule bundle formation
GO:0001725 C stress fiber
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008093 F cytoskeletal anchor activity
GO:0009267 P cellular response to starvation
GO:0010629 P negative regulation of gene expression
GO:0030308 P negative regulation of cell growth
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0046966 F thyroid hormone receptor binding
GO:0051726 P regulation of cell cycle
GO:0097067 P cellular response to thyroid hormone stimulus
1476 O_BomoEE11329_5prime_partial:A_BomoEE_comp64985_c0_seq2
218bp
1477 O_BomoEE1132_complete:A_BomoEE_comp25176_c0_seq1
119bp
1478 O_BomoEE11330_complete:A_BomoEE_comp64985_c0_seq2
183bp
1479 O_BomoEE11331_complete:A_BomoEE_comp64985_c0_seq2
118bp
1480 O_BomoEE11332_complete:A_BomoEE_comp64985_c0_seq2
112bp
1481 O_BomoEE11333_complete:A_BomoEE_comp64993_c0_seq1
816bp
 hypothetical_protein_RR48_00742_[Papilio_machaon]
1482 O_BomoEE11334_complete:A_BomoEE_comp64993_c0_seq1
109bp
1483 O_BomoEE11335_complete:A_BomoEE_comp64993_c0_seq1
103bp
1484 O_BomoEE11336_internal:A_BomoEE_comp64995_c0_seq1
910bp
 PREDICTED:_paired_amphipathic_helix_protein_Sin3a_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000183 P rDNA heterochromatin assembly
GO:0000776 C kinetochore
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0001701 P in utero embryonic development
GO:0002218 P activation of innate immune response
GO:0002230 P positive regulation of defense response to virus by host
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0007568 P aging
GO:0008134 F transcription factor binding
GO:0010243 P response to organonitrogen compound
GO:0010817 P regulation of hormone levels
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0032403 F protein-containing complex binding
GO:0033558 F protein deacetylase activity
GO:0034613 P cellular protein localization
GO:0042754 P negative regulation of circadian rhythm
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043619 P regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0045171 C intercellular bridge
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048511 P rhythmic process
GO:0051595 P response to methylglyoxal
GO:0071333 P cellular response to glucose stimulus
GO:1900181 P negative regulation of protein localization to nucleus
GO:1901675 P negative regulation of histone H3-K27 acetylation
GO:1903351 P cellular response to dopamine
GO:2000678 P negative regulation of transcription regulatory region DNA binding
1485 O_BomoEE11337_complete:A_BomoEE_comp64995_c0_seq1
108bp
1486 O_BomoEE11338_complete:A_BomoEE_comp64995_c0_seq1
101bp
1487 O_BomoEE11339_internal:A_BomoEE_comp64999_c0_seq1
469bp
 PREDICTED:_uncharacterized_protein_LOC101737750_[Bombyx_mori]
1488 O_BomoEE1133_internal:A_BomoEE_comp25211_c0_seq1
161bp
hypothetical_protein,_partial_[Aquabacterium_parvum]
1489 O_BomoEE11340_complete:A_BomoEE_comp65005_c0_seq1
331bp
 PREDICTED:_zinc_finger_protein_93_isoform_X5_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1490 O_BomoEE11341_complete:A_BomoEE_comp65005_c0_seq1
119bp
1491 O_BomoEE11342_complete:A_BomoEE_comp65005_c0_seq2
533bp
 PREDICTED:_zinc_finger_protein_93_isoform_X5_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1492 O_BomoEE11343_complete:A_BomoEE_comp65005_c0_seq2
119bp
1493 O_BomoEE11344_complete:A_BomoEE_comp65005_c0_seq3
575bp
 PREDICTED:_zinc_finger_protein_197-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1494 O_BomoEE11345_complete:A_BomoEE_comp65005_c0_seq3
188bp
1495 O_BomoEE11346_complete:A_BomoEE_comp65005_c0_seq4
331bp
 PREDICTED:_zinc_finger_protein_93_isoform_X5_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1496 O_BomoEE11347_complete:A_BomoEE_comp65005_c0_seq4
119bp
1497 O_BomoEE11348_complete:A_BomoEE_comp65005_c0_seq5
182bp
 PREDICTED:_zinc_finger_protein_92_isoform_X6_[Bombyx_mori]
1498 O_BomoEE11349_complete:A_BomoEE_comp65005_c0_seq5
168bp
1499 O_BomoEE1134_internal:A_BomoEE_comp25222_c0_seq1
101bp
1500 O_BomoEE11350_complete:A_BomoEE_comp65005_c0_seq6
537bp
 PREDICTED:_zinc_finger_protein_271-like_isoform_X1_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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