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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
13111 O_BomoEE21800_3prime_partial:A_BomoEE_comp70261_c0_seq2
164bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13112 O_BomoEE21801_complete:A_BomoEE_comp70261_c0_seq2
143bp
13113 O_BomoEE21802_3prime_partial:A_BomoEE_comp70261_c0_seq3
519bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13114 O_BomoEE21803_5prime_partial:A_BomoEE_comp70261_c0_seq3
153bp
13115 O_BomoEE21804_5prime_partial:A_BomoEE_comp70261_c0_seq3
121bp
13116 O_BomoEE21805_complete:A_BomoEE_comp70261_c0_seq5
337bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13117 O_BomoEE21806_5prime_partial:A_BomoEE_comp70261_c0_seq5
117bp
13118 O_BomoEE21807_complete:A_BomoEE_comp70261_c0_seq6
1073bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13119 O_BomoEE21808_3prime_partial:A_BomoEE_comp70261_c0_seq6
164bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13120 O_BomoEE21809_complete:A_BomoEE_comp70261_c0_seq6
143bp
13121 O_BomoEE2180_3prime_partial:A_BomoEE_comp33593_c0_seq2
427bp
 PREDICTED:_SAFB-like_transcription_modulator_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
GO:0050684 P regulation of mRNA processing
13122 O_BomoEE21810_3prime_partial:A_BomoEE_comp70261_c0_seq7
1216bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13123 O_BomoEE21811_complete:A_BomoEE_comp70261_c0_seq7
143bp
13124 O_BomoEE21812_3prime_partial:A_BomoEE_comp70261_c0_seq8
763bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13125 O_BomoEE21813_complete:A_BomoEE_comp70261_c0_seq8
143bp
13126 O_BomoEE21814_complete:A_BomoEE_comp70261_c0_seq9
450bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13127 O_BomoEE21815_3prime_partial:A_BomoEE_comp70261_c0_seq9
164bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13128 O_BomoEE21816_complete:A_BomoEE_comp70261_c0_seq10
976bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13129 O_BomoEE21817_3prime_partial:A_BomoEE_comp70261_c0_seq10
225bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13130 O_BomoEE21818_complete:A_BomoEE_comp70261_c0_seq10
143bp
13131 O_BomoEE21819_3prime_partial:A_BomoEE_comp70261_c0_seq11
779bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13132 O_BomoEE2181_complete:A_BomoEE_comp33593_c0_seq2
114bp
13133 O_BomoEE21820_complete:A_BomoEE_comp70261_c0_seq11
143bp
13134 O_BomoEE21821_complete:A_BomoEE_comp70261_c0_seq12
960bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13135 O_BomoEE21822_3prime_partial:A_BomoEE_comp70261_c0_seq12
164bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13136 O_BomoEE21823_complete:A_BomoEE_comp70261_c0_seq12
143bp
13137 O_BomoEE21824_complete:A_BomoEE_comp70261_c0_seq13
337bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13138 O_BomoEE21825_complete:A_BomoEE_comp70261_c0_seq14
1089bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
13139 O_BomoEE21826_3prime_partial:A_BomoEE_comp70261_c0_seq14
164bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
13140 O_BomoEE21827_complete:A_BomoEE_comp70261_c0_seq14
143bp
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